| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_21370 |
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| Symbol | |
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| ID | 8396026 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 2371128 |
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| End bp | 2374628 |
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| Gene Length | 3501 bp |
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| Protein Length | 1166 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644986885 |
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| Product | DNA-directed DNA polymerase III PolC |
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| Protein accession | YP_003144496 |
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| Protein GI | 257064824 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATTCG TACATTTGCA TAACCATACC GAGTACTCCA TGTTGGACGG CGCCACCAAG
ATCAAAGCAA TGGTGCGTCG CGCCGCCGAT TTGGGCATGC CTGCCGTCGC CATCACCGAC
CATGGCGTCA TGTGCGGCGT CCCCGAGCTC TGCGACGCCG TCGAAGCCGT CAAGAAGGAG
ACGGGCGTCT ACGTCAAGCC CATCTACGGC TGCGAAGTGT ACTTCACCGA GGACCGTGAA
ATCGGCACTA GGAAGAAGTC GCCCCTGTAC CACCTCATCC TGCTGGCTAA AAACAACGTG
GGCTACCACA ACCTGCTGCA CATCGTTTCC GAATCGCACA TGGACAACTT CTTCTACAAG
CCCCGCACCA CCATCGACGT GCTGGAGAAG TATTCCGAGG GCATCATCGG CACCACGGCC
TGCATGTCGG GCATCGTGCA GCGCCGTCTG GACGACCGCA ACTACGCGGA CGCCCTGGCG
TGGACCAAGC GCTTCGCGGA TATATTCGCC CCGGGCGACT TCTACGTTGA GCTGCAGGAC
CAGGGCCTGA CGTCCCGCGG CGGCCTGACC CAGAAGGAAA TCAACACCCA GCTGACGCAA
ATAGCCCAGG AGCTGGGGCT CAAGACCATC GCCACCAACG ACTTCCATTA CCTGACCCGC
GAAGATGCGG CGGCGCAGGA CATCATGCTG TGCATCGGCA CCGGTTCGCT GCGCGACGAT
GAGAACCGCA TGCGTTTCAG CAACGACGAG TTCTATATGA AGACAGAAGA GGAGATGCGC
GAAGCCCTCA AGGACTTCCC CGAAGCCTGC GACAACACCA TCGAAGTGGC TGAGAAGTGC
TTCGTGGAGC TGGAGCGCGA CTCCGTTTTG CCGCGCTTCC CCTTGCCTCC CGGATACACC
GAAGAGCAGC TGTTCCGCGA GGAGTGCGAG AAGGGCCTGG AGCGTCGCTA CGGCCCCGAT
TGGCGCGAGA TCAAGATCTC CGACGGTATG CATGACGTGT CGGTCCTGGA ACGCTACGAA
TACGAGGCAA GCGTCATCGT GCAGCAGGGC TTCCCGGCGT ACTTCCTTAT CGTGCAGGAA
TACATCCGCT GGGCCAAGGA GCACGGCATC GGCGTAGGCC CGGGCCGCGG CTCGGCAGCA
GGCGCCATCT GCACCTACGC CATGGGCATC ACCGACCTGG AGCCTTTGTC CAACGGTCTG
CTGTTCGAAC GATTCTTGAG CCCCGAGCGC GTGGAGATGC CCGATATCGA CGTCGACTTC
GAGGATGAAC GTCGCCAGGA GGTCATCGAC CACGTGCGTG AGTTCTACGG AGCCGACCAC
ATCGCAGGCG TCATCACTTT CGGCAAGCTG CAGGCGAAAA ACGCCGTCCG CGACGCCGCA
CGCGTGTTGG GCCACCCGTA CAACACGGGC GACCGGCTGT GCAAGGTCAT CGGCGACGAG
CTCGGCATCA AGCTGAAGGA CGCCATCGAG AACAACCCCG ATCTGGCCAA GATCTACAAG
GAGGAGCCTG AATCAAGGGA GATCCTCGAT TCGGCCATGT CCATCGAAGG AAATATCCGC
GGCGAAGGCG TTCATGCCTG CGCTACCATC ATCTGCCGCG ACCCTCTGGT CGACCACGTG
CCCGTCAAAC GCGACACCAA GGGCGGCGGC ATGATTACCC AGTACGACGG CCATTACACG
CCTGAACTGG GTCTTCTGAA AATGGACTTC CTGGGTCTGC GCACGTTGGG CGTGCTGTCC
CGAGCCTGCC GCAACGTGAA GGACCGCTTC GGCATCACCA TCGTTCCCGA CGAGATTCCC
ATCGACGACG AAGGTGCCTA CAAACTCATG CGTTTGGAGA CCCCGTACTC CATGGACGGC
TTGTTCCAGG TGGAATCCGC CCTGTATGTG AGCCTGTTCG CCCGCATGAA GCCCCGTACG
TTCTCGGACA TCGTGGCATC CATCGCGCTC AACCGCCCGG GCCCGTTGGA GAACGGCTTC
GTCGACCTGT ACGTCGACCG CCGCATGGGC CGCAAACCCG TCAGCTATTA CGACGACCGC
CTGAAGCCTC TGCTGGAGGA AACCTACGGC ACCATCGTCT ACCAAGAGCA GATCATGCAG
ATCTCCATGG CTATGAGCGG TTTTTCCGCC GGCAAGGCAG ACAAGCTGCG CAAGGCGATG
GGCAAGAAGC GCATCGAAGT CATGATGCAG CTGAAGGACG ACTGGTGCAA CGGCGCCGTC
GAGAACGGCT TCTCGCTGGA AATCGCCGAG CGCATCTGGC ATGACGCGGA GGAATTCGCA
AAGTACGCCT TCAACAAGTC GCACTCGGCG GCATACGCCG TGCTGGTGTG CCGCACCGCA
TACATGAAGG CCCATTATCC ATATGAATAC ATGGCCGCCG TGCTGTCCAG CTACATGGGC
TCTGCGGACA AGCTGATCAA GTACATTTCC AGCTGCACCC GCAACGGCAT CCCCGTTCTG
CCGCCTGACA TCAACTCCTC CAACCTGGAG TTCACGCCGC TGGAGGAAGG CATCCGCTTC
GGTCTGGCAG GCGTGCGAGG CGTCGGCGCC GCTGTGGCCG AGTCCATCAT CGCCGAGCGC
GACGAGGGAG GTCCCTTCAC CAGTCTGCAC GACTTCGTGA ACCGCGTCGA CGGCAAATGC
TACAACCGCA AAACGTTGGA GGCTCTCGTC AAGGCAGGCG CTTTCGACTC CACGGGCTAC
ACCCGCAAGC AGCTCATGTA CTTCATCGAC GAGACGTCGC TTTTGGAAGA TGTGGCGAAG
CGCCAGCGCG ACCGCGAGAA CGGTCAGGTC AGCATGTTCG ACCTGTTCGG CGACATGGAG
GACAGCGGCT TTGAGGAGGA CATCCCCGCT CCCGACGGTG TTGAGTGGGA CAAGCGCACC
CTGCTTGCCT TCGAGAAGTC CATTTTGAAG ATCTACGTTT CCGACCACCC CTTGAGCCAG
TACGAACGGT CGCTGCGGTC CATCTCCAAG TTCCAACTGG GCGATTTGGC CGACCACAAG
GGCGACATCA AGAACGGCGT GTTCTGCGGC CTTATCAGCA CCGTCCAGAT CAAGATGACG
AAGAAGGGCA AGAAGATGGC CACCTTCGTC ATGGAGGACA CGACGGGGTT CGTGGACTGC
GTGTGCTTCA AATACGACGA GTTCAAGGAC GCCATCGAAG AGGACGCCAT CGTCAAGGTG
AAGGGCAAGT TCGAGCACTC CGAGCGAGGC GACCAGCTGA TGGCCTTCGA GGTTGAGCGC
CTGGATGTGG ACTCCATGAA GCAAGGTCCG TCCAGCCTGC AGATCATGCT GCAATCCTCC
GACTTGAACT CCATGACGTC GGCCCAGCTC AACAACGTGC TGGCGAACTA TCCGGGCCGC
GACCCCGTGG TGCTGCTGGT GCAGCAGTCC GACGGCCGCA AGTTCCGGGC CGAGCTGCCG
GTGACGGTGG ACGCCGCCAA CAACCTGATG TATTCGGAGA TCATGTCGGT ATTCGGCAGA
CCCGTGTGGC AGACCGCTTA A
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| Protein sequence | MAFVHLHNHT EYSMLDGATK IKAMVRRAAD LGMPAVAITD HGVMCGVPEL CDAVEAVKKE
TGVYVKPIYG CEVYFTEDRE IGTRKKSPLY HLILLAKNNV GYHNLLHIVS ESHMDNFFYK
PRTTIDVLEK YSEGIIGTTA CMSGIVQRRL DDRNYADALA WTKRFADIFA PGDFYVELQD
QGLTSRGGLT QKEINTQLTQ IAQELGLKTI ATNDFHYLTR EDAAAQDIML CIGTGSLRDD
ENRMRFSNDE FYMKTEEEMR EALKDFPEAC DNTIEVAEKC FVELERDSVL PRFPLPPGYT
EEQLFREECE KGLERRYGPD WREIKISDGM HDVSVLERYE YEASVIVQQG FPAYFLIVQE
YIRWAKEHGI GVGPGRGSAA GAICTYAMGI TDLEPLSNGL LFERFLSPER VEMPDIDVDF
EDERRQEVID HVREFYGADH IAGVITFGKL QAKNAVRDAA RVLGHPYNTG DRLCKVIGDE
LGIKLKDAIE NNPDLAKIYK EEPESREILD SAMSIEGNIR GEGVHACATI ICRDPLVDHV
PVKRDTKGGG MITQYDGHYT PELGLLKMDF LGLRTLGVLS RACRNVKDRF GITIVPDEIP
IDDEGAYKLM RLETPYSMDG LFQVESALYV SLFARMKPRT FSDIVASIAL NRPGPLENGF
VDLYVDRRMG RKPVSYYDDR LKPLLEETYG TIVYQEQIMQ ISMAMSGFSA GKADKLRKAM
GKKRIEVMMQ LKDDWCNGAV ENGFSLEIAE RIWHDAEEFA KYAFNKSHSA AYAVLVCRTA
YMKAHYPYEY MAAVLSSYMG SADKLIKYIS SCTRNGIPVL PPDINSSNLE FTPLEEGIRF
GLAGVRGVGA AVAESIIAER DEGGPFTSLH DFVNRVDGKC YNRKTLEALV KAGAFDSTGY
TRKQLMYFID ETSLLEDVAK RQRDRENGQV SMFDLFGDME DSGFEEDIPA PDGVEWDKRT
LLAFEKSILK IYVSDHPLSQ YERSLRSISK FQLGDLADHK GDIKNGVFCG LISTVQIKMT
KKGKKMATFV MEDTTGFVDC VCFKYDEFKD AIEEDAIVKV KGKFEHSERG DQLMAFEVER
LDVDSMKQGP SSLQIMLQSS DLNSMTSAQL NNVLANYPGR DPVVLLVQQS DGRKFRAELP
VTVDAANNLM YSEIMSVFGR PVWQTA
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