Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_21300 |
Symbol | |
ID | 8396019 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 2364546 |
End bp | 2365178 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644986878 |
Product | sortase-like acyltransferase |
Protein accession | YP_003144489 |
Protein GI | 257064817 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1247] Sortase and related acyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCATGG CTCCGAACTG TGAAAGGATG CACATGGCCA CCAACGCGCT TACCATCAGG GCGGCGACGC CTGCGGATGC GGCAGAGCTG CTGGCGATCT ACGCGTTCTA CGTCGAGAAC ACCGCCATCA CCTTCGAATA CGACGTGCCA AGCGTCGAGG AGTTCGCCCG CCGCATCGCC GGCACGCTGG AGAAGTATCC CTATCTGGTG GCGGAAAGCT CCGACGGCAT CCAGGGGTAC GCGTATGTAG GGCAGTTCCA CGCGCGGCCT GCCTACGATT GGGCGGTGGA GACCAGCGTG TACGTACGCC GCGACGGCCG CACGCGGGGC ACGGGGCGCG CGCTGTACGA TGCGCTCGAG AAGGTGCTGG CCGCCCAAGG TATCCTGAAC CTGGAGGCGT GCATCGCCTA CGCCCCTGTG GAAGACGAGT ATCTGACCAA CAACAGTGTC GGGTTCCACG ACCACATGGG CTATCGCATG GTGGGCAGGT TCGAGAAGTG CGGATTCAAG TTCAACCGGT GGTACGACAT GGTGTGGATG GAGAAGCTCA TCGGCGAGCA TTGCGCCGAC CAGCCTCCAG TGCGGTGGTT TCCGCAGGTC GCAAGCGACT TGGAGAACAT TCTGAACTCG TGA
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Protein sequence | MRMAPNCERM HMATNALTIR AATPADAAEL LAIYAFYVEN TAITFEYDVP SVEEFARRIA GTLEKYPYLV AESSDGIQGY AYVGQFHARP AYDWAVETSV YVRRDGRTRG TGRALYDALE KVLAAQGILN LEACIAYAPV EDEYLTNNSV GFHDHMGYRM VGRFEKCGFK FNRWYDMVWM EKLIGEHCAD QPPVRWFPQV ASDLENILNS
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