Gene Shel_21300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_21300 
Symbol 
ID8396019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2364546 
End bp2365178 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content62% 
IMG OID644986878 
Productsortase-like acyltransferase 
Protein accessionYP_003144489 
Protein GI257064817 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1247] Sortase and related acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATGG CTCCGAACTG TGAAAGGATG CACATGGCCA CCAACGCGCT TACCATCAGG 
GCGGCGACGC CTGCGGATGC GGCAGAGCTG CTGGCGATCT ACGCGTTCTA CGTCGAGAAC
ACCGCCATCA CCTTCGAATA CGACGTGCCA AGCGTCGAGG AGTTCGCCCG CCGCATCGCC
GGCACGCTGG AGAAGTATCC CTATCTGGTG GCGGAAAGCT CCGACGGCAT CCAGGGGTAC
GCGTATGTAG GGCAGTTCCA CGCGCGGCCT GCCTACGATT GGGCGGTGGA GACCAGCGTG
TACGTACGCC GCGACGGCCG CACGCGGGGC ACGGGGCGCG CGCTGTACGA TGCGCTCGAG
AAGGTGCTGG CCGCCCAAGG TATCCTGAAC CTGGAGGCGT GCATCGCCTA CGCCCCTGTG
GAAGACGAGT ATCTGACCAA CAACAGTGTC GGGTTCCACG ACCACATGGG CTATCGCATG
GTGGGCAGGT TCGAGAAGTG CGGATTCAAG TTCAACCGGT GGTACGACAT GGTGTGGATG
GAGAAGCTCA TCGGCGAGCA TTGCGCCGAC CAGCCTCCAG TGCGGTGGTT TCCGCAGGTC
GCAAGCGACT TGGAGAACAT TCTGAACTCG TGA
 
Protein sequence
MRMAPNCERM HMATNALTIR AATPADAAEL LAIYAFYVEN TAITFEYDVP SVEEFARRIA 
GTLEKYPYLV AESSDGIQGY AYVGQFHARP AYDWAVETSV YVRRDGRTRG TGRALYDALE
KVLAAQGILN LEACIAYAPV EDEYLTNNSV GFHDHMGYRM VGRFEKCGFK FNRWYDMVWM
EKLIGEHCAD QPPVRWFPQV ASDLENILNS