| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_21290 |
|---|
| Symbol | |
|---|
| ID | 8396018 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | - |
|---|
| Start bp | 2363190 |
|---|
| End bp | 2364086 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 644986877 |
|---|
| Product | proline-specific peptidase |
|---|
| Protein accession | YP_003144488 |
|---|
| Protein GI | 257064816 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | [TIGR01250] proline-specific peptidases, Bacillus coagulans-type subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGAAA TGAAATCCGG CTACATCGAT TACAAGGGCT TCAAAACGTA CTACGAAATT
TACGGCGAGC GGAAGGACAA CGGGAAGAAA CCCCTGCTCA TCCTGCACGG TGGCCCAGGC
GACACCCATC TGTACCTGCT CAACTACCGC GACATGGCCG ATTTGTACGA CCGCCAGATC
ATCTTCTACG ACCAGATCGG CTGCGGCAAA TCCAACATTC CTCACCAGGA GGACGACTTC
TACGATTACG ACCTGTGGAT CAATGAGTTC TTCACCGTGC GCGATGCGCT GGGCCTGGAC
GACTTCCACC TGTTCGGCAA CAGCTGGGGC GGCATGCTGG CAACCATGTG CATGCTGAGG
GACGACACGG GCGTGGCATC CATGGTCGTC AACGGCTCCC CGTACAACTG CCAGACGTGG
TTGTCCGAGG CCAACCGCCT GATTTTGTAT CTGCCCGAAG AGATGCAGAA GGCCATCGCC
GAGGCCGAGG CCGCCGGCGG AGACTACAGC ACCCCCGAGC GCGAAGCCGC CTACATGGAG
TACTACCGCC GCCATGTGGT GGGCTGCGAC CCCTGGCCGG ATTTCGTGCA GGAGGCCTTC
AAGCCCGAGA ACGTGGGCGA GTGCTTCAAC GTCATGCAGG GCGCAAGCGA ATTCGTCATG
ACCGGCAAGA TGAAGGACTT CAACGTGCTT GACCAGGTCA AGAACCTGAA GGTGCCCACC
ATGCTGTTGT CCGGCACCAA CGACGAGGCC ACGCCGTTCC TGATCAAGGA GGCTTACGAC
GCCATGCCCG CAGGCACCGA GTGGGTGCTG GTCCAGGGCG CGGCGCACAT CGGCAACGCC
ACCCACGCCA AAGAATACTT CGAGGCCGTG GAGAACTTCA TCGAGCGCCA CGAGTAG
|
|---|
| Protein sequence | MAEMKSGYID YKGFKTYYEI YGERKDNGKK PLLILHGGPG DTHLYLLNYR DMADLYDRQI
IFYDQIGCGK SNIPHQEDDF YDYDLWINEF FTVRDALGLD DFHLFGNSWG GMLATMCMLR
DDTGVASMVV NGSPYNCQTW LSEANRLILY LPEEMQKAIA EAEAAGGDYS TPEREAAYME
YYRRHVVGCD PWPDFVQEAF KPENVGECFN VMQGASEFVM TGKMKDFNVL DQVKNLKVPT
MLLSGTNDEA TPFLIKEAYD AMPAGTEWVL VQGAAHIGNA THAKEYFEAV ENFIERHE
|
|---|
| |