Gene Shel_21200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_21200 
Symbol 
ID8396009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2350353 
End bp2351162 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content65% 
IMG OID644986869 
Productprecorrin-6x reductase 
Protein accessionYP_003144480 
Protein GI257064808 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2099] Precorrin-6x reductase 
TIGRFAM ID[TIGR00715] precorrin-6x reductase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCAGC CCGCTTCGAA CGATTCGCGC CCGACGGTGC TCGTGTACGG CGGCACCACG 
GAATCGCGCA CGCTGGTCGA GGGTCTGCTG GCCACGGGCA TGTGCCGCGT GGTGCTGTGC
GTCGCCACCG AATACGGCGC GGCCGTCATG CCGCCCCATA AGGACCTGGC CTGCCTGGTC
GGCCGCCAGC AGGCAGACGA CATGGAACTT CTCATGGGCC GTGAGTCCTT CCTGTGCGTG
GTGGATGCCA CCCATCCTTA CGCGACGGAT GTGACGGCGA ACATCGCGCA GGCGGCAGGT
GCGGTGGGGC TGTCCCTCAT CCGGGTGACG CGGGCGGAAG ACGCCGACGA CGTGTGGCTG
ACGGCGCAGA CCGTCGAAGA GGCTGCACGC ATCGCCAATG ACCTGGCGGG AAACATCCTG
TTGACCACTG GCACCAAGGA CCTTCCCGTT TTCGCGAATG CCATCGACGG GTTTGCCGAG
CGGGTGTACG CGCGTATCCT GCCTGCGCGG GAAAGCCTCG ACCTCGCGCT GTCGGCCGGC
CTTGCGCCGT CGCACATAAT AGCCATGCAG GGTCCGTTCT CCATGAGGCT GAACATGGCG
TTGATCGAGG AGTTCGGCAT TTCTGTCATG GTGACGAAGG CGTCGGGCAG GCAGGGCGGA
TTCCAGGAGA AATCCGATGC GGCGAAGGAG GCCGGCTGCA CGCTGGTGGT GATCGCGCGG
CCCGTTGAGG AAGAGGGCTT GAGCGTCCAC AAAGCGGTGG CGCAGGTCAT CGGCATGCTG
CGGAAGCGAG GAGCGAATCA TGCTGGTTAA
 
Protein sequence
MMQPASNDSR PTVLVYGGTT ESRTLVEGLL ATGMCRVVLC VATEYGAAVM PPHKDLACLV 
GRQQADDMEL LMGRESFLCV VDATHPYATD VTANIAQAAG AVGLSLIRVT RAEDADDVWL
TAQTVEEAAR IANDLAGNIL LTTGTKDLPV FANAIDGFAE RVYARILPAR ESLDLALSAG
LAPSHIIAMQ GPFSMRLNMA LIEEFGISVM VTKASGRQGG FQEKSDAAKE AGCTLVVIAR
PVEEEGLSVH KAVAQVIGML RKRGANHAG