Gene Shel_21190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_21190 
Symbol 
ID8396008 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2349008 
End bp2350363 
Gene Length1356 bp 
Protein Length451 aa 
Translation table11 
GC content66% 
IMG OID644986868 
Productprecorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit,precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit 
Protein accessionYP_003144479 
Protein GI257064807 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2242] Precorrin-6B methylase 2 
TIGRFAM ID[TIGR02467] precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit
[TIGR02469] precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGTTA ACATCATCGG CGCGGGCATG GGCACGCTGA ACACCATGAC CGTGGCGGCC 
CATATGGCCC TGAAGGGAAG CGGACTGGTC ATCGGCGCGC AGCGGCTGCT GGACAAACTG
GGGCCCTTCG CACCCGAAGG CGCCGCGCAG CTGCCGCTGT ACCGACCCGA TGACATAGTG
GATGCCCTCA AGGCCCATGC GGACGTGCCG CAGGCGAGCA TCCTGCTTTC CGGCGACGTG
GGATTCTACA GCGGTGCGGC GGGCATCCAC CGTGCCCTGG CGCCTTACGA GACGGAGCGG
CGGGCGGGGT TCTTCATGGT GGAAGACGGT CATATCCAGG CCGATTACTT CGACATCGAC
GCCGACGGCA TGCCCCGGGC CGCATCCGCT CCTGCCGAAG GCGGCTTCGC CTGCAGCGTG
AAGATTCATT CGGGCGTGTC GTCGCTCGTC TATTTCTGCG ACAAGCTGCG CCTGCCCTGG
CAGGACGTGT TCGCCACCTC GGCCCACGGA CGCGACTGCG ACGTGGCGGG CGAGGTGCGC
CGCCATACAA AGACGTTTTT CCTGACAGGC GGCAAGGCCA AGGCCCAGGA CGTGTGCGCG
CGTCTGCAGG ATGCCGGGTT CGGTGGTTTG CGGGCCGTGG TGGGCGAGGG CCTGTCGTAT
CCCGGCGAGC GGTTCGTCTG CGGCACCGTG GACGAGCTTG CGGGGCTGAC CTTCGACGAT
CTGGCGGTGC TGCTGGTGTT CAACCCCCTT GCGGCTGCGC CGACGACGGC CTGCCTGCCC
GATGACGCCT TCGAGCGCTC GTCGGAAGGG GGACGCATGG TTCCCATGAC CAAAGAGGAA
ATCCGGGCCG TGGCGGTGTC CAAGCTGGGC ATCGCGCCCG ATTCCGTGGT GTGGGACGTA
GGCTCGGGCA CAGGTTCGAT TACCGTGGCC TGCGCCCGGG CGGCGTGCGC CGGACAGGTG
CATGCGGTTG AAATGCGGCC CGAAGCTGTC GAGCTGACCA GGCGAAACGT ATCTAAGTTC
GGACTTGGCA ACGTGACGGT GACGCAAGGC CGCGCACCCG AGGCGCTGGC GGGGCTCCCG
GCTCCCGATT GCGTGTTCAT CGGTGGGACG ACCGGTTCCA TGGCGGATGT CATACAGGCG
GCCGTGTCGG CGAATCCCCA GGTGCGCATC GTGGCCACGG CGGTCACTTT GGAAACGACG
GCGCAGCTGG CCCAAACGGT TGCGGCCTGT GGGCTTCAGC ATGCGGAAAT CATCCAGCTG
TCGGTAGCCC GAAGCCATCA GGTCGGCGAG TATCACCTGA TGAAGGCGGA AAACCCTGTG
TTCATGCTGA GTGCAGACGG GCCGGGTGCA CGATGA
 
Protein sequence
MLVNIIGAGM GTLNTMTVAA HMALKGSGLV IGAQRLLDKL GPFAPEGAAQ LPLYRPDDIV 
DALKAHADVP QASILLSGDV GFYSGAAGIH RALAPYETER RAGFFMVEDG HIQADYFDID
ADGMPRAASA PAEGGFACSV KIHSGVSSLV YFCDKLRLPW QDVFATSAHG RDCDVAGEVR
RHTKTFFLTG GKAKAQDVCA RLQDAGFGGL RAVVGEGLSY PGERFVCGTV DELAGLTFDD
LAVLLVFNPL AAAPTTACLP DDAFERSSEG GRMVPMTKEE IRAVAVSKLG IAPDSVVWDV
GSGTGSITVA CARAACAGQV HAVEMRPEAV ELTRRNVSKF GLGNVTVTQG RAPEALAGLP
APDCVFIGGT TGSMADVIQA AVSANPQVRI VATAVTLETT AQLAQTVAAC GLQHAEIIQL
SVARSHQVGE YHLMKAENPV FMLSADGPGA R