| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_21120 |
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| Symbol | |
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| ID | 8396001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 2341435 |
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| End bp | 2342499 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644986861 |
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| Product | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
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| Protein accession | YP_003144472 |
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| Protein GI | 257064800 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2038] NaMN:DMB phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR03160] nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGCAT TGGATTTTGC AGCACTTAAC GCTGCCATCC CGCCTTTCGA TACGGAGTCG
GCCGACTTGG CCCGCGAGCA CTGGGCTGCC GTGGCCAAGC CTCTGGGCAG CCTGGGCGTT
TTGGAAGACG CCGTGGTCCA GCTGGCGGGC ATCATGGGCA CGCCGAACCC GGAGATTCGC
GACCGAGCGG TGCTGGTGTT CTGCGCCGAC AACGGCGTGG TGGCCCAAGG CGTCACCCAG
TGCGGCCAGG AGGTTTCCAC GCTGGTTGCC GATTCGGTGG CGGCGGGCAC GTCTTCGGTG
GCCGTTATGG CCAAGACGGT CCGCGCACAG GTGGTGTCGG TGGATGTGGG CCTGGCCACG
CCGCCTTCCA ACCCCCGCGT GGTGGGATGC TCGGTGGCGC CGGGAACGGC GGACATGACC
GAAGGTCCGG CCATGACTCC CGAGCAGGCC GCTGCGGCCA TCGACGTGGG CATCGACGCC
GCCCACTCGA TGCGGTCCCG GGGTTTCGAC ATCCTGTGCG CCGGCGAGAT GGGCATCGGC
AACACCACCA CGTCGTCGGC CATCGCCAGC GTGCTCCTGG GGCTCGACCC TACCGTGAGC
GTCGGCCGGG GCGCGGGGCT TGACGACGAA GGCCTTGCCC GCAAGGAAGC TGCGGTCCGC
CGCGCCATCC AGGTGAACGC ACCCGATCCG GCGGACGCCT TCGATGTGCT GTGCAAGGTT
GGCGGGTTCG ACATCTGCGC CATGGCCGGT CTCTATATAG GAGGTGCGCT GTGCGGCATG
CCCGTGGTGG TGGACGGGCT GGTGAGCGCC GTCGCCGCGC TGGCGGCAAG TCGGCTGTGT
CCCGCATGTA CGCATGCGAT GCTGGCGTCC CATATTTCGA CGGAGCCTGC AACCGTCGCC
ATTCTGGAGG CATTGGGCCT GCATCCGCCC ATAAACGCGG GCATGCGCCT GGGGGAGGGA
AGCGGGGCTG TGGCCCTGCT GCCGCTGCTG GACATGGCCC TGGCCGTGTA CGACGCAGCG
TCCTTCGACG ATTTGGGCAT GGATGCCTAT GAGGAGCTTT CCTGA
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| Protein sequence | MTALDFAALN AAIPPFDTES ADLAREHWAA VAKPLGSLGV LEDAVVQLAG IMGTPNPEIR
DRAVLVFCAD NGVVAQGVTQ CGQEVSTLVA DSVAAGTSSV AVMAKTVRAQ VVSVDVGLAT
PPSNPRVVGC SVAPGTADMT EGPAMTPEQA AAAIDVGIDA AHSMRSRGFD ILCAGEMGIG
NTTTSSAIAS VLLGLDPTVS VGRGAGLDDE GLARKEAAVR RAIQVNAPDP ADAFDVLCKV
GGFDICAMAG LYIGGALCGM PVVVDGLVSA VAALAASRLC PACTHAMLAS HISTEPATVA
ILEALGLHPP INAGMRLGEG SGAVALLPLL DMALAVYDAA SFDDLGMDAY EELS
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