Gene Shel_21050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_21050 
Symbol 
ID8395994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2336741 
End bp2337676 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content63% 
IMG OID644986854 
Producthypothetical protein 
Protein accessionYP_003144465 
Protein GI257064793 
COG category[K] Transcription 
COG ID[COG0846] NAD-dependent protein deacetylases, SIR2 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAACC TCCGCGGATT CGCAGTTGCA GACGACTCGC CCGAAAGCGT CGCCGGCGCA 
ATCGAGCGAC TCGCTTGCGC GCTTGAAGAA GCCGACGCCG TTGCCATCGG CGCCGGAGCC
GGCCTGTCCA CCTCCGCCGG CATGGTCTAC GACGGAGACC GGTTCCACAC GTACTTCGAC
GACTTCGAGA CGAAATACGG CTTTACCGAC ATGTACAGCG GCGGGTTCAC CCGGTTCGAA
ACGCCCGAGG AGCAATGGGC GTTCTGGAGC CGCATGATTG CCATGAACCG CCTGGTCAAA
GCGCCGGGCA CCGCCTACAC CGACCTGTTT GAGCTCGTAA AGGACAAAGA CTACTTCGTC
ATCACCACCA ATGTCGACCA CCAGTTCCAG CTGTCGGGCT TCGACAAGCA GCGTCTCTTC
TACACCCAAG GCGACTACGG CCTGTTGCAG TGCCCGCTGC CCTGCCATCG CAGCACCTAC
GAAAACGAGG ATGCGGTCCG CGCAATGCTC GCCGCTCAGG GCTACACCTT CGCCGAAGAC
GGCACGCTGA CTCCTCCCGA CGACCGCGAG CCGGCCATGG CCGTGCCGAC GGACCTGCTT
CCCACCTGTC CCAAATGCGG GCGCCCCATG GCTATGAACC TGCGCATCGA CGACACCTTC
GTCGAGGACG AAGGTTGGCG CGCCGCCAGC AAGCGGTATG CCGACTACCT GTTCGCGCAT
CGAAGCGGCA AGGTTGTGTA CCTGGAGCTG GGCGTAGGCA TGAACACGCC GGGCATCATC
AAATACCCGT TCTGGCGCTA CGCCGGAGCC AACAAGCACG CCACGTTCGC CTGCATCAAC
CTGGGCATGG CCGCAGCTCC CGAGGAAATC GCCGACCAGT GCATCCTTAT CGATGCCGAC
ATCCAGCAGA CGCTGGCAAA GCTGCTGGAG CGTTGA
 
Protein sequence
MRNLRGFAVA DDSPESVAGA IERLACALEE ADAVAIGAGA GLSTSAGMVY DGDRFHTYFD 
DFETKYGFTD MYSGGFTRFE TPEEQWAFWS RMIAMNRLVK APGTAYTDLF ELVKDKDYFV
ITTNVDHQFQ LSGFDKQRLF YTQGDYGLLQ CPLPCHRSTY ENEDAVRAML AAQGYTFAED
GTLTPPDDRE PAMAVPTDLL PTCPKCGRPM AMNLRIDDTF VEDEGWRAAS KRYADYLFAH
RSGKVVYLEL GVGMNTPGII KYPFWRYAGA NKHATFACIN LGMAAAPEEI ADQCILIDAD
IQQTLAKLLE R