Gene Shel_21040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_21040 
Symbol 
ID8395993 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2335927 
End bp2336718 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content64% 
IMG OID644986853 
Productpredicted phosphatase, C-terminal domain of histone macro H2A1 like protein 
Protein accessionYP_003144464 
Protein GI257064792 
COG category[R] General function prediction only 
COG ID[COG2110] Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACGCC ACGCCGAAGA GCTCAAGCAG CTGATACGCT ACCTGTCCGA AGAGAGCGGC 
GAGCGCATTC CCGCAGATCT TGATGCGCTC GACTCTCAGC AGCTATGGAA CACCTTCCGC
GGCCTGGTCA ACGTCCGCAT GCCCAGACGC GCCTCGAGCG GATTCTACGC CATGCAGGAC
GCACTGCTCC AAGCGATCAT CCAAGAGGAC GGCGTAACCG ACGCCGCGAC GCTTCCCCGC
ACCGCGCTTG ACCAGCGGCT TTCTGTGTGG CAGGGGGACA TCACCCGCCT GCGCGCCGAC
GCCATCGTCA ACGCGGCCAA CAGCCAGATG CTGGGCTGCT GGGCCAAGTG CCACAGCTGC
ATCGACAACG TCATTCACAC CTACGCAGGC GTGCAGCTGC GGGAGGAATG CGACCGCATC
ATGCGGGCCC AAGGGGAAAA CGAACCCACC GGGCACGCCA AGGTGACCGG CGCCTACAAT
CTGCCGTCGA AGCATGTCAT CCACACGGTG GGGCCCATCG CCCAGGGACA TCCGACGGCG
CGCCACCGCC TTCAGCTGGC CCAATGCTAC ACGTCCTGTC TGGATGCGGC CGCCGCGACG
GGATGTGAAT CCATCGCCTT CTGCGGCATC TCGACCGGCG TGTACGGGTT CCCCGCAGAG
CAGGCGGCGC CTATCGCCGT AGACACCGTG CGCGATTGGC TCGACCGGCA CCCCGATGTG
CCCATGCACG TTGTGTTCAA TGTGTTCGGC AACAGGCAAC TCTCCATTTA CCAGGATATC
CTCTGCATGT AA
 
Protein sequence
MQRHAEELKQ LIRYLSEESG ERIPADLDAL DSQQLWNTFR GLVNVRMPRR ASSGFYAMQD 
ALLQAIIQED GVTDAATLPR TALDQRLSVW QGDITRLRAD AIVNAANSQM LGCWAKCHSC
IDNVIHTYAG VQLREECDRI MRAQGENEPT GHAKVTGAYN LPSKHVIHTV GPIAQGHPTA
RHRLQLAQCY TSCLDAAAAT GCESIAFCGI STGVYGFPAE QAAPIAVDTV RDWLDRHPDV
PMHVVFNVFG NRQLSIYQDI LCM