Gene Shel_20930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_20930 
Symbol 
ID8395982 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2324464 
End bp2325318 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content64% 
IMG OID644986842 
Productmethenyltetrahydrofolate cyclohydrolase /5,10-methylenetetrahydrofolate dehydrogenase (NADP+) 
Protein accessionYP_003144453 
Protein GI257064781 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0190] 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAAA TCCTGAAAGC CGCACCGGTC GTTGCGGCAA TGACCGAGGA GCTGGCCTTG 
CGCGCCCAGG CGTGCAGAGC TGCAGGTGCG GCGCCAACGC TGGTCATCCT GCGTGTGGGC
AACAAGCCTG ACGACCTTTC CTACGAACGT GGCGCCCGCA AGCGCTGCGA ATCGGTAGGC
GTCGATCTGC GGGTCGAGGT CCTTCCCGAG GACTGTTCCC AGGACGAGCT TCTGGCCGCT
ATCCACGCCA TCAACGACGA CGAATCCATC CACGGATGCA TCATGATGCG TCCGCTTCCT
GGCGGCTTCG ACGAGCATGC CGCCTGCCAG GCTCTGGATC CGGCCAAAGA CGTGGACTGC
ATGACCGACG GGTCGCTCAT GGGCGTGTTC GTCAACAACG GCCAGGGGTA TCCGCCCTGC
ACGGCCCAGG CGGTTCTGGA AATGCTCGAC CACTACGGAT ACGATCTGAC GGGTGCGAAG
GTCACGGTAA TCGGCCGATC GCTGGTCATC GGCAAACCGG TGTCGGTCAT GCTGCAGGCC
CGCAACGCCA CCGTCACCAT GTGCCACACC CGCACGAAAG ACCTGGCCTC CGAATGCCGA
AACGCTGACA TTGTCGTGGT GGCCGCTGGC CGCATCGGCA CGCTTCGCTC CGAACATGTC
CGCGCCGGCC AGACTATCAT TGACGTTGGC ATCAACTGGG ACGAGGATGC CGGCAAGCTT
GCGGGGGACG TGGACTTCGC CTCCGTCGAG CCGATCGTCG CCGCCATCTC GCCCGTGCCA
GGCGGTGTGG GTTCCGTTAC CACTGCCGTT CTGGCCAAAC ACGTGATTGA CGCAGCAGAA
AGGACGTTGT GCTAG
 
Protein sequence
MAEILKAAPV VAAMTEELAL RAQACRAAGA APTLVILRVG NKPDDLSYER GARKRCESVG 
VDLRVEVLPE DCSQDELLAA IHAINDDESI HGCIMMRPLP GGFDEHAACQ ALDPAKDVDC
MTDGSLMGVF VNNGQGYPPC TAQAVLEMLD HYGYDLTGAK VTVIGRSLVI GKPVSVMLQA
RNATVTMCHT RTKDLASECR NADIVVVAAG RIGTLRSEHV RAGQTIIDVG INWDEDAGKL
AGDVDFASVE PIVAAISPVP GGVGSVTTAV LAKHVIDAAE RTLC