Gene Shel_20770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_20770 
Symbol 
ID8395966 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2307297 
End bp2308439 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content60% 
IMG OID644986826 
Productcation diffusion facilitator family transporter 
Protein accessionYP_003144437 
Protein GI257064765 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0053] Predicted Co/Zn/Cd cation transporters 
TIGRFAM ID[TIGR01297] cation diffusion facilitator family transporter 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.799337 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCATCG ACACGACGGG GAGCCAAGAA GGTCAGCAGC TGTCCCGCGA TGCCCAAATC 
GTGCGCACGA GCATTGTGGG TATTGCGGCA AATATGCTGC TGGCGGCGTT CAAGGCGGCG
GTGGGCCTGC TTTCGAACTC AATCGCCATC GTGCTGGACG CGGTGAACAA CCTGTCCGAC
GCCCTGTCAT CGGTCATCAC CATCGTGGGG ACGAAGCTTG CCGGCCGCAC GCCGGACCGC
AAACATCCCT ACGGCTACGG CCGAATCGAA TACATCACCA CCATCATCAT CGGAGCCATT
GTCCTGGCGG CCGGCTTCAC GTCGCTGAAG GAGTCGGTGT CGAGCATCAT CAACCACGAG
GTCGCGTCGT ACGAGACCGT GACGCTGGTG ATTGTCGCCG TCGCCGTGGT GGCCAAGGTG
GTGCTCGGCC GATACGTCAA GGCTGTCGGC GAACGTGTGG GGTCCGACTC ACTTGTAGCC
TCGGGCACTG ACGCCACCAT GGATTCGATC ATCTCAGCAT CCACGCTGGT CGCTGCGTTC
ATCTATATCA TCTGGGGTGT CAGCTTGGAA GGCTGGCTGG GCGCCGTCAT CTCCGTGGTC
ATCATGAAGG CCGGCTTCGA CATCCTGAAG GAGGCCCTGG ACAAGATTCT GGGCCAGCGT
GTGGATGGCG ATCTGAGCCG CGCCATCAAA CAGACCGTCG CGGAGACGGA AGGCGTCTAC
GGTGCCTACG ACCTAGTGCT GAACGACTAC GGCCCGGACC GTCTTACCGG CAGCGTGCAT
GTGGAGGTCG ACGACGATGC TACGGCTCGC GATATCGACA TCATCACCCG ACGCATCCAA
CAGGCGGTGT TCGCGAAGTA CGGCGTAATC ATCAACACGG TGGGCGTGTA CGCCACCAAC
AACACTGGTC TGGCCGGTCA GATTCGTGAA CGGGCATACG AGGTGGCGAA GGCCCATCCC
GAGGTGCTCG AGACCCACGG CTTCTACCTG GATGAGGAGC TTGACCGGTT GAGTTTCGAC
GTTGTCGTCA GCTTCGACTC GAAAGACCGG CAGGCCGTCG CAGACGAGAT TCGCAGGGAA
GTGCAGGAGC TGTATCCGCA GTATAAAACT GTGGTTCTTT TAGATGAGGA CGTAAGCGAA
TAA
 
Protein sequence
MAIDTTGSQE GQQLSRDAQI VRTSIVGIAA NMLLAAFKAA VGLLSNSIAI VLDAVNNLSD 
ALSSVITIVG TKLAGRTPDR KHPYGYGRIE YITTIIIGAI VLAAGFTSLK ESVSSIINHE
VASYETVTLV IVAVAVVAKV VLGRYVKAVG ERVGSDSLVA SGTDATMDSI ISASTLVAAF
IYIIWGVSLE GWLGAVISVV IMKAGFDILK EALDKILGQR VDGDLSRAIK QTVAETEGVY
GAYDLVLNDY GPDRLTGSVH VEVDDDATAR DIDIITRRIQ QAVFAKYGVI INTVGVYATN
NTGLAGQIRE RAYEVAKAHP EVLETHGFYL DEELDRLSFD VVVSFDSKDR QAVADEIRRE
VQELYPQYKT VVLLDEDVSE