Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_20770 |
Symbol | |
ID | 8395966 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 2307297 |
End bp | 2308439 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644986826 |
Product | cation diffusion facilitator family transporter |
Protein accession | YP_003144437 |
Protein GI | 257064765 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0053] Predicted Co/Zn/Cd cation transporters |
TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.799337 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCATCG ACACGACGGG GAGCCAAGAA GGTCAGCAGC TGTCCCGCGA TGCCCAAATC GTGCGCACGA GCATTGTGGG TATTGCGGCA AATATGCTGC TGGCGGCGTT CAAGGCGGCG GTGGGCCTGC TTTCGAACTC AATCGCCATC GTGCTGGACG CGGTGAACAA CCTGTCCGAC GCCCTGTCAT CGGTCATCAC CATCGTGGGG ACGAAGCTTG CCGGCCGCAC GCCGGACCGC AAACATCCCT ACGGCTACGG CCGAATCGAA TACATCACCA CCATCATCAT CGGAGCCATT GTCCTGGCGG CCGGCTTCAC GTCGCTGAAG GAGTCGGTGT CGAGCATCAT CAACCACGAG GTCGCGTCGT ACGAGACCGT GACGCTGGTG ATTGTCGCCG TCGCCGTGGT GGCCAAGGTG GTGCTCGGCC GATACGTCAA GGCTGTCGGC GAACGTGTGG GGTCCGACTC ACTTGTAGCC TCGGGCACTG ACGCCACCAT GGATTCGATC ATCTCAGCAT CCACGCTGGT CGCTGCGTTC ATCTATATCA TCTGGGGTGT CAGCTTGGAA GGCTGGCTGG GCGCCGTCAT CTCCGTGGTC ATCATGAAGG CCGGCTTCGA CATCCTGAAG GAGGCCCTGG ACAAGATTCT GGGCCAGCGT GTGGATGGCG ATCTGAGCCG CGCCATCAAA CAGACCGTCG CGGAGACGGA AGGCGTCTAC GGTGCCTACG ACCTAGTGCT GAACGACTAC GGCCCGGACC GTCTTACCGG CAGCGTGCAT GTGGAGGTCG ACGACGATGC TACGGCTCGC GATATCGACA TCATCACCCG ACGCATCCAA CAGGCGGTGT TCGCGAAGTA CGGCGTAATC ATCAACACGG TGGGCGTGTA CGCCACCAAC AACACTGGTC TGGCCGGTCA GATTCGTGAA CGGGCATACG AGGTGGCGAA GGCCCATCCC GAGGTGCTCG AGACCCACGG CTTCTACCTG GATGAGGAGC TTGACCGGTT GAGTTTCGAC GTTGTCGTCA GCTTCGACTC GAAAGACCGG CAGGCCGTCG CAGACGAGAT TCGCAGGGAA GTGCAGGAGC TGTATCCGCA GTATAAAACT GTGGTTCTTT TAGATGAGGA CGTAAGCGAA TAA
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Protein sequence | MAIDTTGSQE GQQLSRDAQI VRTSIVGIAA NMLLAAFKAA VGLLSNSIAI VLDAVNNLSD ALSSVITIVG TKLAGRTPDR KHPYGYGRIE YITTIIIGAI VLAAGFTSLK ESVSSIINHE VASYETVTLV IVAVAVVAKV VLGRYVKAVG ERVGSDSLVA SGTDATMDSI ISASTLVAAF IYIIWGVSLE GWLGAVISVV IMKAGFDILK EALDKILGQR VDGDLSRAIK QTVAETEGVY GAYDLVLNDY GPDRLTGSVH VEVDDDATAR DIDIITRRIQ QAVFAKYGVI INTVGVYATN NTGLAGQIRE RAYEVAKAHP EVLETHGFYL DEELDRLSFD VVVSFDSKDR QAVADEIRRE VQELYPQYKT VVLLDEDVSE
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