Gene Shel_20750 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_20750 
Symbol 
ID8395964 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2306116 
End bp2306676 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content63% 
IMG OID644986824 
Productconserved protein of DIM6/NTAB family 
Protein accessionYP_003144435 
Protein GI257064763 
COG category[R] General function prediction only 
COG ID[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGGAAT TCATGAAGAA GGAAATCAAC GTTTTCGACT ATGCGGGCGA CATTCTGAAG 
GCCCTGCGCA TGGGCGTGCT CCTGACCACC AAGGCCGAGG ACCGCACCAA CGTCATGACC
ATCGGCTGGG GCAGTATCGG CGTGGAGTGG GGCACCCCCG TGTTCACGGC GCTGGTGCGC
GAGGGACGCT TCAGCCGCGA GCTGCTGGAC AAGAACGGCG AGTTCACGGT GAGCGTTCCC
TACGAGCGTC CCTTCGACCG CCAGGTCCTG GGCATTGCCG GCAGCCGTTC CGGCCGTCAA
CAGAACAAGT ATCGCGAGTT GAACCTGGCG GAGGAGGCTC CGCTTCAGGT GTCTACGCCC
GCCTACCGCG ATTTCCCGCT GACGCTTGAG TGCCGCGTGC TGTACCGTCA GCCTCAGGAG
CTGGCCCTCA TGCCCGAGGA CATCCAACAG CGCTGGTATC CGCAGGACAA GGGCAGCGAA
GTTTGCGGCT CCAACAAGGA CGCCCACATC GCTTACATCG CCGAAATCGT CGCCGCCTAC
ATCGTCGAGG ACGACGAATA G
 
Protein sequence
MEEFMKKEIN VFDYAGDILK ALRMGVLLTT KAEDRTNVMT IGWGSIGVEW GTPVFTALVR 
EGRFSRELLD KNGEFTVSVP YERPFDRQVL GIAGSRSGRQ QNKYRELNLA EEAPLQVSTP
AYRDFPLTLE CRVLYRQPQE LALMPEDIQQ RWYPQDKGSE VCGSNKDAHI AYIAEIVAAY
IVEDDE