Gene Shel_20730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_20730 
Symbol 
ID8395962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2303640 
End bp2304350 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content59% 
IMG OID644986822 
Productpredicted ATPase 
Protein accessionYP_003144433 
Protein GI257064761 
COG category[R] General function prediction only 
COG ID[COG3910] Predicted ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACGACA TGAGATACCT GCTGTCGTGT TGGGTGGATT GGGATGCCCT GCCGGCCCAG 
TCGTACGTGC GCGGGATTCC CGCCATCGCG TCGATGGGCA CGGTGAATTT CGCCGGCAAC
GTGACGTTTT TCGTCGGCGA GAACGGCTCG GGCAAGTCGA CGCTGCTTGA AGCCATAGCC
ATGGCCTTCG GGTTCAACCT GGAGGGAGGC ACCCGCAATT TCGCGTTCAG CACCTACGAA
CACACTACTG AGCTGGGGGA AGCCCTGCGC ACGCAACGCG GAGGACGCCG TCCGCAGGCG
GGATACTATT TCAAGGCGGA GACGTTTCTG AACGTGGCGC GCATGGCGAC GATCGAATAC
CTCGACCCTC GGTTCAACTA CGCGGAGATG TCCCATGGCG AAGGTTTTCT GGCGTTCATG
CAAAGCGTGA AGCGCGAAGG ACTGTTCCTC ATGGACGAGC CGGAAGCGGC GCTATCCCCC
CAACGCCAGC TCACGTTGCT GCTGTATCTG CATCAAAGGG CGCAGACAGG TTCGCAGTTC
ATCATCGCGA CCCATTCGCC GATTCTTTTG GGATTGCCGG GGGCACAGAT CCTGCGATTC
GATGACGCGA TTTCGGAATG CGAATACGAA GAAACCGATC CGTACCAGAT CACGAAGATG
TTCATGGACG ACCGCGAAGG GTTTCTGCAT CACCTGTTCG ACGAGGGCTG A
 
Protein sequence
MYDMRYLLSC WVDWDALPAQ SYVRGIPAIA SMGTVNFAGN VTFFVGENGS GKSTLLEAIA 
MAFGFNLEGG TRNFAFSTYE HTTELGEALR TQRGGRRPQA GYYFKAETFL NVARMATIEY
LDPRFNYAEM SHGEGFLAFM QSVKREGLFL MDEPEAALSP QRQLTLLLYL HQRAQTGSQF
IIATHSPILL GLPGAQILRF DDAISECEYE ETDPYQITKM FMDDREGFLH HLFDEG