Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_20640 |
Symbol | |
ID | 8395953 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 2291892 |
End bp | 2292713 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644986813 |
Product | Flp pilus assembly protein CpaB |
Protein accession | YP_003144425 |
Protein GI | 257064753 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3745] Flp pilus assembly protein CpaB |
TIGRFAM ID | [TIGR03177] Flp pilus assembly protein CpaB |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGAGAC GGAAATCGGT CGTATTCGGC ATCCTGTGCG GCATCGCCTG CGCGTTGTGC GTGGCGATGT ACGCCCAACA GCTTCAGGCT GATGCCGATG CCCAACGCGC AGAGGCTTTG GCTCGCTACG GTGGCGAGCA GACGGAAGTT TGGGTGGCAA CGCGCGACAT CGCACCGGGA GAGACGGTCG ACGAGACCAA TGCGGAATAC AGGATGTGGC TCGTCGAGCT GCTTCCTCAC GATGCCGTTT CCGATCTGGC CGGCCTGGAG AGCCGTGTTG CAACCAGCCC CATCGTGCAA GGCGAGGTTA TCTCTGCGCA GCGGTTCGTA GCCGATGACG AGGCCCTCGG CACGCCGGTT CCCGAAGGAT TGTGTGCCGT CAGCGTTCCC GCAGAAGATG TCGCGACGGT GGGCGGCTCC ATAAGGGCCG GCAGCAGGGT TGACGTGTAC GTTTCTTCGG GAACAACGAC CGACCTTCTT GCCCATGACG TGCTGGTCTT GTTCACGAGC GCATCTTCGG CCGACGGTTC GGAGGCCATC TCCTGGGCAA CCCTTGCCGT CGAGCCCGAA ATGGTACAGG AGCTCATCTC TGCCGCCGAA AGGACGAGCC TGTATTTCTC CCTTCCTTCG GATTCCGTGT TGGCTGATGG TTCGTATGCA ACCGAATCCG AAAAAGGCGA GGCGGACGGA CCCCAGGAAG CCGAACCCGA GCCAGAGGTC GAGGCTAAAT CGGATGAAGG CGAACCCGAT GCTTCGGCTG ACACGGCCTT TGATGAAGGT CCTTCGACGG AATCCAAATC CCAGGAAGAA GAGGTGCTTT GA
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Protein sequence | MQRRKSVVFG ILCGIACALC VAMYAQQLQA DADAQRAEAL ARYGGEQTEV WVATRDIAPG ETVDETNAEY RMWLVELLPH DAVSDLAGLE SRVATSPIVQ GEVISAQRFV ADDEALGTPV PEGLCAVSVP AEDVATVGGS IRAGSRVDVY VSSGTTTDLL AHDVLVLFTS ASSADGSEAI SWATLAVEPE MVQELISAAE RTSLYFSLPS DSVLADGSYA TESEKGEADG PQEAEPEPEV EAKSDEGEPD ASADTAFDEG PSTESKSQEE EVL
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