Gene Shel_20610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_20610 
Symbol 
ID8395950 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2289171 
End bp2289506 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content70% 
IMG OID644986810 
ProductDNA-binding protein, excisionase family 
Protein accessionYP_003144422 
Protein GI257064750 
COG category 
COG ID 
TIGRFAM ID[TIGR01764] DNA binding domain, excisionase family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.319293 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGAG AGGCGACCAC CCAACCCCGA TCAACTAAAG ACTACCTGAC GCTGCGCGAG 
GCGTCCGAAC TCGGCTACGG CGAGCCGAAG ACGCTGAAGG CGCGCATCAA GGACGGCACG
CTGCCCGCCA CCAAGATGGG CGGCCAGAAA TGGCGCGTGC GCCGCGCCGA CCTCGAGGCG
CTCGCGTGCC CCGACGGGTA CGGCGAGCGC ACCGGGGCGA TGACGCGCGA GGAGGCGATC
CGCACACGCA TCGAGCGTGC CGCCCGCGAA CTCGCGGAAC TGGCTCCGGA GATCTCCGAC
GAGCAGCGCG CGGCGATCCG CGCGACGCTG CTGTAG
 
Protein sequence
MTREATTQPR STKDYLTLRE ASELGYGEPK TLKARIKDGT LPATKMGGQK WRVRRADLEA 
LACPDGYGER TGAMTREEAI RTRIERAARE LAELAPEISD EQRAAIRATL L