Gene Shel_20540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_20540 
Symbol 
ID8395943 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2279155 
End bp2279979 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content67% 
IMG OID644986803 
Producthypothetical protein 
Protein accessionYP_003144415 
Protein GI257064743 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.619628 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.114661 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGATG GTATTGGAAT CGGGCGCCGT CGCGCTGCTG TCGTCACGAT GGCCGCGGTC 
GGCGCGACGG TGGCCGCCGC CCTGGCGGCG ACGGCGGCAT ACGGTGCCGT GATGGCCCCG
GAGCCCGTCG ACACGGCGCC GCAGGCGCCG TTGCAGGCGC GGGCCGTGTC TGTGGACGGG
CCGGTTGCGG TTCCCGACGT CATCGCGGTC AAGGCGGACG CGGAGACGGG GCGCGGGTTG
CAGGGCGATG CCGCCGGCTT CGGCGGGTTC AAGGTTCGGG TGGATTACTA CGACGGTTCG
TTGCCCTATG GGTACAGCCA GGCGAGCGCT GTGTTCGCGG GCGATTCCGA CGGCGTCGTC
CGCTTCGTCG ATGCGCGCCC GGTCGACGGG ACGTCGTGGC GGTACGTGCG CGATGGCGCG
AACGTCATCC CGCTGGGCAC GGTGACCGTG ACCGAGGTGG CGGCGCCTGC GGGCTACGAG
GTAGACGGCC TCGTGCATTT GGCCCATGTT GTGCAGGACG GCGATGGCGC GGTGCTCGTG
TACGAGGAAA GCGTGCTGTC GGACGACATC CTGTGGATGC GTTTCGACGA CGTGTGGGAG
AAGTATCTCG CCGACGAGAT CAGTGCAGGC GAGTTCCTGG AAAAGACGGT TAGGCTCGTC
GAGAAACTCG GTTTCCATGG AAAGATGCCG ACACCGACGG GCAGCGCGGA CATCGACGCA
TTGCATGATG CGCTGCGCCG TTTCATCGAT GGCGAGTACG ATGCAGGCGA GTTCCTGTCG
ACGGCACAAG AGTGCAGGGA GAGCATCGAG AACAAGCCGT CGTAG
 
Protein sequence
MDDGIGIGRR RAAVVTMAAV GATVAAALAA TAAYGAVMAP EPVDTAPQAP LQARAVSVDG 
PVAVPDVIAV KADAETGRGL QGDAAGFGGF KVRVDYYDGS LPYGYSQASA VFAGDSDGVV
RFVDARPVDG TSWRYVRDGA NVIPLGTVTV TEVAAPAGYE VDGLVHLAHV VQDGDGAVLV
YEESVLSDDI LWMRFDDVWE KYLADEISAG EFLEKTVRLV EKLGFHGKMP TPTGSADIDA
LHDALRRFID GEYDAGEFLS TAQECRESIE NKPS