| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_20490 |
|---|
| Symbol | |
|---|
| ID | 8395938 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | + |
|---|
| Start bp | 2277151 |
|---|
| End bp | 2277696 |
|---|
| Gene Length | 546 bp |
|---|
| Protein Length | 181 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644986798 |
|---|
| Product | Uncharacterized protein family UPF0102 |
|---|
| Protein accession | YP_003144410 |
|---|
| Protein GI | 257064738 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.205618 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.240792 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGGAA ACATCCACAT CGCAACGCAA GCCGAGTTGC TCGAGCGAGG CATTAAAGCC
ACAGGCCGAT ACCTCGAACT CAACGGCGAG ACCGTGCTCG ACGCGGCTTA CGAGACGCCC
GCAGGGCGCA TCGACCTCGT CACGCGCGAC GCGAACGACG TCGTCCGCTT CGTCATGGTG
CGCGTGCGCA GGAGCATGCT GCCCGACATG ATGAAGATCG GCGACGAGGA GCGCGGCGTG
CTCGAGATGC GCGCGTCGAC TTGGCTCGAA GCGCATCGCG ACGCAGTCGA CTGCGCCATC
TCGTTCGACA TCGTCGACCT CGCCATCATC GGCAACGGCA ACGATCGCGC GATCATGCGC
GTCGCACGTG ATGCGCTCGC CGGCTCGTGC CCGTATACGA CGGGCAACGA TCTCCTGGCC
CGCGCCGAAC TGCGCGCTGC TACCGTTCCC GACGGCGCTG TCGAGCTCGA TATCGACGAC
GACGCCGAGG AGCCCGCGGA GCGGCCTGCC GAGGACATCG CCGCAGAAAG CGTCGACGAA
TCCTAA
|
|---|
| Protein sequence | MDGNIHIATQ AELLERGIKA TGRYLELNGE TVLDAAYETP AGRIDLVTRD ANDVVRFVMV
RVRRSMLPDM MKIGDEERGV LEMRASTWLE AHRDAVDCAI SFDIVDLAII GNGNDRAIMR
VARDALAGSC PYTTGNDLLA RAELRAATVP DGAVELDIDD DAEEPAERPA EDIAAESVDE
S
|
|---|
| |