Gene Shel_20440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_20440 
Symbol 
ID8395933 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2273907 
End bp2274458 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content61% 
IMG OID644986793 
Productpredicted phosphoesterase or phosphohydrolase 
Protein accessionYP_003144405 
Protein GI257064733 
COG category[R] General function prediction only 
COG ID[COG4186] Predicted phosphoesterase or phosphohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.5474 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.257186 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACT TCTACATCAG CGACACCCAC TTCGGACACG CAAACATCAT CGGGTTCTGC 
AACCGTCCGT TCGCCGACGT CCATCAGATG GACCGCGCCA TGGTCGAGCT CTGGAACAGC
CGTGTCACCG AGAACGACCA CGTCTGGCAT CTCGGCGACT TCTGCTACAA GTCCGGCAAC
GACCCGCGTT CGTACCTGCG GCAACTCCAA GGTCACATCC ACCTAATTGT GGGAAACCAC
GACTTCAAGG GCCTCCTGCG CCTTCCCGAC CTCTCCGACT ACGTCGACAG CGTCGAGCAC
GCCACGTCTC GCGACGACGG GCACGGGCAT AGGATGTTCA TGTGCCACTA CCCGCTCGCG
TACCCACCCC GTCACATCTG GTGCCTCTAT GGGCACATTC ACGACAACGT CGTTTGGCCC
GGTTTCGACG TCGTCATGTC GCAGGAGCGC TCGCTCAACT GCTGCGTCGA AGTCAACGGC
TACATGCCCG TCACCTTCGA CGAGCTCGTC CGCAACAACG CGCGTTGGCG CGAGTCCTGC
CGCAACCGAT AG
 
Protein sequence
MTDFYISDTH FGHANIIGFC NRPFADVHQM DRAMVELWNS RVTENDHVWH LGDFCYKSGN 
DPRSYLRQLQ GHIHLIVGNH DFKGLLRLPD LSDYVDSVEH ATSRDDGHGH RMFMCHYPLA
YPPRHIWCLY GHIHDNVVWP GFDVVMSQER SLNCCVEVNG YMPVTFDELV RNNARWRESC
RNR