Gene Shel_20240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_20240 
Symbol 
ID8395913 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2254064 
End bp2255095 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content42% 
IMG OID644986775 
Producttype I restriction modification DNA specificity protein 
Protein accessionYP_003144387 
Protein GI257064715 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0226618 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.190026 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCTTA ATAATGCGAA TAGACGAGTC TTTTTGCTCA CAGAGTTATT TGAGATAACG 
ATGGGCAATA AGCTTGACAT GAATAAGATG ACTTTTGACG CGCCAGAGGT GAATTTCGTG
GGTCGTTCGA GTTCCAATAA TGGCGTAGCG GCAAAGGTTG ACAGAATTGC TGGTTTAGAA
CCGTACCCTT CTGGGGATAT TACGGTTGCC TTAGGTGGTA GTCTTGGAAC TTCATGCTTG
CAGTTCGAAC CATTCTATAC TTCCCAAAAT GTTGCTGTGC TGCATGCACT TGAGCCGATG
AGCATACAAG CGAAATTGTT CATATGTTCT GTGATTATGT TTGAGTGTCG ATATAAGTAT
TCAGCGTTCG GGAGAGAACT GAATGTTCAT ATACGAGACG ATTTTAATTT GGAGCTGCCA
GTTACACCAA GCGGCGACCC TGACTGGGCT TTTATGGAAG CATATATTGA TGGGTTGCAT
TCGAAGCCAG TAACAACGGG TATACGGTCA GTAAACGTGC CGCTTGATAT TCAAAACTGG
AAAGAATTCT TGGTTGATGA CGTTCTTAAA ATTATCAATG GCAAAGGGAT TACTATTGAT
GAAATTGCAG AGCATCCTGG TGATTTAGAA GCCGTTCAGA GCGGTGAAGA GAACATGGGT
GTGTTGGGTT TAATAAGTCG TGAGTATTGC GACGAGATGG ATTACAAACG AGTAGACGAA
CCCTGTTTGA CTGTTGCTCG TAGTGGAACG TCTGGTTATG TTGCATATCA TCCGAATGGA
TGTGTTGTTG GAGACTCAGC AAAAATTCTT TTGTTGAAAG ATAGCTCTGC AAAGAACGTC
TACGTATACC TGTTCGTAAG AACAATTTTG GAAGCAAACC GCTATAAGTA TTGCTATGGT
CGTAAAGTGA CCGAGGATGG ATATAAAAAC GTGATGATTA AGCTTCCTGT TAAATCGGAT
GGAAGTCCTG ATTGGGTATG GATGGAACAA TACATGAAGT CACTTCCGTA TAGCGACCGA
ATTAATCTTT AG
 
Protein sequence
MSLNNANRRV FLLTELFEIT MGNKLDMNKM TFDAPEVNFV GRSSSNNGVA AKVDRIAGLE 
PYPSGDITVA LGGSLGTSCL QFEPFYTSQN VAVLHALEPM SIQAKLFICS VIMFECRYKY
SAFGRELNVH IRDDFNLELP VTPSGDPDWA FMEAYIDGLH SKPVTTGIRS VNVPLDIQNW
KEFLVDDVLK IINGKGITID EIAEHPGDLE AVQSGEENMG VLGLISREYC DEMDYKRVDE
PCLTVARSGT SGYVAYHPNG CVVGDSAKIL LLKDSSAKNV YVYLFVRTIL EANRYKYCYG
RKVTEDGYKN VMIKLPVKSD GSPDWVWMEQ YMKSLPYSDR INL