Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_20190 |
Symbol | |
ID | 8395908 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 2251681 |
End bp | 2252115 |
Gene Length | 435 bp |
Protein Length | 144 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644986770 |
Product | hypothetical protein |
Protein accession | YP_003144382 |
Protein GI | 257064710 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00873639 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.105252 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTCACA AAGCAGTTCT CGTGCCTGTC GGCGATATGC CGCGCATCGT GGAGGTCGAA ACCTACAAGG ATATCCAGCG ATACGTCGGC GGCAACATCG AACCGTGCAG TTGGGTATTC GATGATGCGC CTAGCGTCTA CGTCAACGAA GAAGGTAAGT TCACGTGCCG ACCGAACAGG GCAATCTATG CCACCGACAA GGACGCTGGA AAAGTCACCT GGGATGGCAA GAAAATCAAA GAAGGTGACC TTCTCGATAT CCTCTTTGGT GACTTCGTTT GCATCGGTTT TGACCCTGAA ACAGGTGAAG ACCGCGACAT TTCTGACGAT GAAATCCAAC TCGTGATTGA GCGCTTCGGC TCATACGAGT CGATTGACAG CGGCGTTATC GAAACGCTGA AAATCCAACT CGGAGCAGCA GGTGACCGCG CCTAG
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Protein sequence | MSHKAVLVPV GDMPRIVEVE TYKDIQRYVG GNIEPCSWVF DDAPSVYVNE EGKFTCRPNR AIYATDKDAG KVTWDGKKIK EGDLLDILFG DFVCIGFDPE TGEDRDISDD EIQLVIERFG SYESIDSGVI ETLKIQLGAA GDRA
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