Gene Shel_20190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_20190 
Symbol 
ID8395908 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2251681 
End bp2252115 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content52% 
IMG OID644986770 
Producthypothetical protein 
Protein accessionYP_003144382 
Protein GI257064710 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00873639 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.105252 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCACA AAGCAGTTCT CGTGCCTGTC GGCGATATGC CGCGCATCGT GGAGGTCGAA 
ACCTACAAGG ATATCCAGCG ATACGTCGGC GGCAACATCG AACCGTGCAG TTGGGTATTC
GATGATGCGC CTAGCGTCTA CGTCAACGAA GAAGGTAAGT TCACGTGCCG ACCGAACAGG
GCAATCTATG CCACCGACAA GGACGCTGGA AAAGTCACCT GGGATGGCAA GAAAATCAAA
GAAGGTGACC TTCTCGATAT CCTCTTTGGT GACTTCGTTT GCATCGGTTT TGACCCTGAA
ACAGGTGAAG ACCGCGACAT TTCTGACGAT GAAATCCAAC TCGTGATTGA GCGCTTCGGC
TCATACGAGT CGATTGACAG CGGCGTTATC GAAACGCTGA AAATCCAACT CGGAGCAGCA
GGTGACCGCG CCTAG
 
Protein sequence
MSHKAVLVPV GDMPRIVEVE TYKDIQRYVG GNIEPCSWVF DDAPSVYVNE EGKFTCRPNR 
AIYATDKDAG KVTWDGKKIK EGDLLDILFG DFVCIGFDPE TGEDRDISDD EIQLVIERFG
SYESIDSGVI ETLKIQLGAA GDRA