Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_20090 |
Symbol | |
ID | 8395898 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 2244794 |
End bp | 2245450 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644986760 |
Product | hypothetical protein |
Protein accession | YP_003144372 |
Protein GI | 257064700 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.195136 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.669354 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTACTG CAGACGCGAT CAAGCCTACG GCTCCTGCCG TATACGGCAT CAATGCGTTG GATTTGGGCA ACCGACGCCG CAAGCAGCAG GCGATTGGAT TCGGTGCGGT TTCTCGCGCT ATGGCCACCG CCGCCGCACC GGTTTTGCAA GAACCGGCGG ATTGCGCCCT TGAGCACGAG GGCGGGGAGG CCGTTGACGT GCGGACCACG TGGTGGGGGA GGCTCCGCGG GCTTTTGGCC GCACGCTCCC GCAGCATTCC CACAATCGTG CTCATGCCGT GCCGCGATAT CCACACCTAC GGCATGGGCC ATTCCATAGA CATCGCCTTC TTCGATGAGC GCGGTACGGC CATCGCCGTC ATGAGGGACC TGCCGCCGCG TTCACGGTTC GGATGCCACG ACGCGCGCTT CGCCGTGGAA CGTCCCTCCG CCCCGAACAT GCCTTGGTTC GAGCTTGGCC AGAACTGTTT TTCCGAGGTC ATAAGCGGGC CTGCCGCTAA ATCGGAGCAG CCGTCGGAAG CCGGCGCCTC CCCTCAGACC AAGGCGGCGA AAGTCGCGCC CGTCCAGGCG ACGCAGTATC TCTGCGTACC GGCCCATACT ATTGTCGAAC CGCGCAAAAT CCGGGTGTCG GGCGCGCCGG CCTTCCAAAC CGCGTAA
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Protein sequence | MSTADAIKPT APAVYGINAL DLGNRRRKQQ AIGFGAVSRA MATAAAPVLQ EPADCALEHE GGEAVDVRTT WWGRLRGLLA ARSRSIPTIV LMPCRDIHTY GMGHSIDIAF FDERGTAIAV MRDLPPRSRF GCHDARFAVE RPSAPNMPWF ELGQNCFSEV ISGPAAKSEQ PSEAGASPQT KAAKVAPVQA TQYLCVPAHT IVEPRKIRVS GAPAFQTA
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