Gene Shel_20090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_20090 
Symbol 
ID8395898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2244794 
End bp2245450 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content64% 
IMG OID644986760 
Producthypothetical protein 
Protein accessionYP_003144372 
Protein GI257064700 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.195136 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.669354 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTACTG CAGACGCGAT CAAGCCTACG GCTCCTGCCG TATACGGCAT CAATGCGTTG 
GATTTGGGCA ACCGACGCCG CAAGCAGCAG GCGATTGGAT TCGGTGCGGT TTCTCGCGCT
ATGGCCACCG CCGCCGCACC GGTTTTGCAA GAACCGGCGG ATTGCGCCCT TGAGCACGAG
GGCGGGGAGG CCGTTGACGT GCGGACCACG TGGTGGGGGA GGCTCCGCGG GCTTTTGGCC
GCACGCTCCC GCAGCATTCC CACAATCGTG CTCATGCCGT GCCGCGATAT CCACACCTAC
GGCATGGGCC ATTCCATAGA CATCGCCTTC TTCGATGAGC GCGGTACGGC CATCGCCGTC
ATGAGGGACC TGCCGCCGCG TTCACGGTTC GGATGCCACG ACGCGCGCTT CGCCGTGGAA
CGTCCCTCCG CCCCGAACAT GCCTTGGTTC GAGCTTGGCC AGAACTGTTT TTCCGAGGTC
ATAAGCGGGC CTGCCGCTAA ATCGGAGCAG CCGTCGGAAG CCGGCGCCTC CCCTCAGACC
AAGGCGGCGA AAGTCGCGCC CGTCCAGGCG ACGCAGTATC TCTGCGTACC GGCCCATACT
ATTGTCGAAC CGCGCAAAAT CCGGGTGTCG GGCGCGCCGG CCTTCCAAAC CGCGTAA
 
Protein sequence
MSTADAIKPT APAVYGINAL DLGNRRRKQQ AIGFGAVSRA MATAAAPVLQ EPADCALEHE 
GGEAVDVRTT WWGRLRGLLA ARSRSIPTIV LMPCRDIHTY GMGHSIDIAF FDERGTAIAV
MRDLPPRSRF GCHDARFAVE RPSAPNMPWF ELGQNCFSEV ISGPAAKSEQ PSEAGASPQT
KAAKVAPVQA TQYLCVPAHT IVEPRKIRVS GAPAFQTA