Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_19960 |
Symbol | |
ID | 8395885 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 2233881 |
End bp | 2234858 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644986747 |
Product | transcriptional regulator/sugar kinase |
Protein accession | YP_003144359 |
Protein GI | 257064687 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1940] Transcriptional regulator/sugar kinase |
TIGRFAM ID | [TIGR00744] ROK family protein (putative glucokinase) |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.606323 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACTC ATGATTCAAC TGATGCGTCT GCCCAGGTAG GCCCAGGGCG CGCCCAAACG GGGAAGCTGC TTGTCGGAAT CGACATGGGC GGCACGACCA TCAAGGTGGG CCTTGTGGAC GAAAGCGGTG CGCTGCATGC GCGACAGACC GTTCCTACAG GAGGATTAAG CGACAAGGAC TCCCAGCATG CCTTCGCCTC CATGGTCAGA AGCATTGTCG GAGACAAGCA GGGGCTCATC CACGGCGTGG GGTTCGCCGT GCCTGGCCCC GTTGACCGGG ACGGCAACCT GCGGATGGGC GTCAACGTCG ATTTGGATCT GCCGGGGATG CTTCAGGCGC TGCAGCGCGA GTTCCCTTCG GCGTGGGTAC GCGCTTTGAA CGACGCAAAC GCCGCAGCGT TTGGAGAATG CAACCGCGGT GCGGCGGTAG GTCGCAAGGA CGTGCTACTG GTGACGCTCG GCACCGGCGT CGGGGCCGGG GTTGTGGCGG ACGGGAAGGT GCTCGTGGGC GCCCGAGGCA TCGCTGGCGA AATCGGCCAT ATGTGCGTCG AGGCCAGCGG CGTGAAGTGC AACTGCGGGC GGTACGGCTG TTTGGAACAG TACTCTTCCG CACGTGGCCT TATCCGTCTC ATGCGCGAGT CTGCCCTGCA GGCCGGCGAC GAGCGTTCCG CTTCGGTCGA GGACGCCCGC CAGGTCATGG AAGCGTTCGA ACGGTCGAAC CCGCATGCCG TGCACGCCAT GGAAGTGTTC AGCGATCGGC TAGGCTATGC GCTGGCCAAC ATCGCATGCG TCATCGACCC TGAGGTCATC CTACTGGGCG GCGGCGTGTC GGAGTGTTTC GATCTGTTCG AGGACATGCT GAGGGCATCA TTCGATATGT ACGCCCTTGG CGAGAGCCGC TCTGTGGAAT TTCGCAAGGC GGCCCTGGGC AACGAGGCCG GTATGGTCGG GGCAGCGTTG TTCTCGATCG CCCAGTAG
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Protein sequence | MTTHDSTDAS AQVGPGRAQT GKLLVGIDMG GTTIKVGLVD ESGALHARQT VPTGGLSDKD SQHAFASMVR SIVGDKQGLI HGVGFAVPGP VDRDGNLRMG VNVDLDLPGM LQALQREFPS AWVRALNDAN AAAFGECNRG AAVGRKDVLL VTLGTGVGAG VVADGKVLVG ARGIAGEIGH MCVEASGVKC NCGRYGCLEQ YSSARGLIRL MRESALQAGD ERSASVEDAR QVMEAFERSN PHAVHAMEVF SDRLGYALAN IACVIDPEVI LLGGGVSECF DLFEDMLRAS FDMYALGESR SVEFRKAALG NEAGMVGAAL FSIAQ
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