Gene Shel_19890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_19890 
Symbol 
ID8395878 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2218229 
End bp2220322 
Gene Length2094 bp 
Protein Length697 aa 
Translation table11 
GC content62% 
IMG OID644986740 
Productglutamine synthetase 
Protein accessionYP_003144352 
Protein GI257064680 
COG category[R] General function prediction only 
COG ID[COG3968] Uncharacterized protein related to glutamine synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGAGA GCCTGACCGA TCGCTACGGT ACCATGGTCT TTTCCGACCG TGTCATGAAA 
GAGTACCTGC CTTCCGACAT CTACAAGAAG CTCAGCGACA CCATCAAGAA GGGCAAGCCC
CTCGACTTGG ACGTCGCCAA TGCGGTTGCC CATGCCATGA AGGAATGGGC GATGTCGAAG
GGCGCCACGC ATTTCGCGCA CTGGTTCCAG CCGTTGACGG GCATTACCTC CGAGAAGCAT
GACTCTTTCA TCGAGCCCTT GCATGACGGC TCTGCCATTG CGAAGTTCTC CGGCAAGGAA
CTCATCCAGG GCGAGCCCGA CGCATCCAGT TTCCCTAACG GCGGTCTGCG TGCCACGTTC
GAGGCCCGCG GCTATTCCGC ATGGGATCCC ACGTCCTCGG CCTTCATCAA AGACGAGGTG
CTGTGCATCC CCACGGCCTT CTGCTCCTAC ACTGGCGAGG CTCTGGACAA GAAGACCCCG
CTGCTGCGCT CCATGGCCAC TCTTGACGTG CAGGCCAAGC GCGTGCTGGC CCTGTTCGGA
AAACACCCCG AGACCATCAC GGTCAACGTC GGCAACGAGC AGGAATACTT CCTCATCCCC
GAGGAGATGT ACGAGAAGCG CCAGGACCTC ATCATGACGG GACGCACGCT GTTCGGCGCG
CCGCCCTGCA AGGGCCAGGA GCTTGACGAG CATTACTTCG GCGCCATCCG CCCGACGGTG
AACGCCTTCA TGAAGGAGCT CGACGACGTG CTGTGGGGCT TCGCCGTCGC AGCCAAGACC
AAGCATAACG AGGTGGCCCC TGCCCAGCAT GAGCTTGCGC CCGTGTACTG CAACGCTAAC
CGCGCCATCG ACGAGAACCT GCTCACCATG GAGGAGATGC GTCTGCTGGC AAGCCACCAC
GGCCTGGTGT GCCTGCAGCA TGAGAAGCCG TTCGAGGGCA TCAACGGCTC CGGCAAGCAC
AACAACTGGT CCTTCGGCAC CGAAGATGAG AACCTGCTCG ACCCGGGCGA CACCCCCGAG
GAGAACCTGC AGTTCCTCGT GGTGCTGACC TGCATCATCG AGGCAGTCGA CAACTACCAG
GACCTGCTGC GCATGTCCGT TGCCTCCTGC GGCAACGACC ATCGTCTGGG TGCCGACGAG
GCGCCTCCGG CCATCGTCTC CATCTTCTTG GGCGACGAGC TGTCCGACAT CGTCGAGGGC
TTGGCCGAAG GCCATGGCGT GGGCCACAAG CTGCGCGAGT CGCTGGACTT CGGCGTGGCC
GTCCTGCCCA CCTTCGACCG CGACACCACC GACCGCAACC GCACGAGCCC CTTCGCCTTC
ACGGGCAACA AGTTCGAGTT CCGCATGCCA GGCTCGGCGG TCAACCCCTC CGACGCCAAC
ATGGTGCTCG ACACCGCCGT CGCCAAGTCC CTGAAAGACT TCGCCGACGC CATGGAGAAC
CGGGGCGACG TCGCCTTCGA GGATGCCGCC ATCGAGTACC TGCGTAAGAG CCTCGCCGAG
CACAAGCGCA TCCTGTTCTC GGGCAATGGC TATTCCGAAG AGTGGCATGA AGAGGCGGCC
CGCCGCGGAC TGAGCAATTA CCCCACCACG GCCGACGCGC TGCCTTGCTT CGTGGCCGAG
AAGAACATCG CCCTGTTTGA GGAAATGGAA GTTCTCTCCG AGGTGGAGGT CCGCAGCCGC
TACGAGGTGA AGCTGGACAA GTACTGCAAG CTCATGAACA TCGAGGCCGC AACCATGGAA
CGCCAGGCCC GCCGCACGTA CCTGCCTGTC ATCAGCGCGT ACGCCACCAA GATCGCCAAG
GGTATCACCA CGGTGACCAC CGCCATGCCG GAAGCGCCCA TGAGCCACGA GCGCCGCGAG
TTGAAGATCC TGACCGAAGG CGTGAGCGAC ATCTACGAAG GCATCGACGC TTTGACCGCC
ATCCATCAGA AGGCCAAGTC CTGCGAGAAC TCCCAGGATA TGGCCAACGT CTACGCCCAC
GAGGTAGCGC CTGCCATGAC ATCCCTGCGC GCCGCCGTCG ACGCCATGGA GCCCATCGTT
GCCCGCGAGT ACTGGCCTGT TCCGACCTAC AACGACATCC TGTTCTACTG CTAA
 
Protein sequence
MTESLTDRYG TMVFSDRVMK EYLPSDIYKK LSDTIKKGKP LDLDVANAVA HAMKEWAMSK 
GATHFAHWFQ PLTGITSEKH DSFIEPLHDG SAIAKFSGKE LIQGEPDASS FPNGGLRATF
EARGYSAWDP TSSAFIKDEV LCIPTAFCSY TGEALDKKTP LLRSMATLDV QAKRVLALFG
KHPETITVNV GNEQEYFLIP EEMYEKRQDL IMTGRTLFGA PPCKGQELDE HYFGAIRPTV
NAFMKELDDV LWGFAVAAKT KHNEVAPAQH ELAPVYCNAN RAIDENLLTM EEMRLLASHH
GLVCLQHEKP FEGINGSGKH NNWSFGTEDE NLLDPGDTPE ENLQFLVVLT CIIEAVDNYQ
DLLRMSVASC GNDHRLGADE APPAIVSIFL GDELSDIVEG LAEGHGVGHK LRESLDFGVA
VLPTFDRDTT DRNRTSPFAF TGNKFEFRMP GSAVNPSDAN MVLDTAVAKS LKDFADAMEN
RGDVAFEDAA IEYLRKSLAE HKRILFSGNG YSEEWHEEAA RRGLSNYPTT ADALPCFVAE
KNIALFEEME VLSEVEVRSR YEVKLDKYCK LMNIEAATME RQARRTYLPV ISAYATKIAK
GITTVTTAMP EAPMSHERRE LKILTEGVSD IYEGIDALTA IHQKAKSCEN SQDMANVYAH
EVAPAMTSLR AAVDAMEPIV AREYWPVPTY NDILFYC