Gene Shel_19880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_19880 
Symbol 
ID8395877 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2216692 
End bp2218026 
Gene Length1335 bp 
Protein Length444 aa 
Translation table11 
GC content61% 
IMG OID644986739 
ProductL-glutamine synthetase 
Protein accessionYP_003144351 
Protein GI257064679 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0174] Glutamine synthetase 
TIGRFAM ID[TIGR00653] glutamine synthetase, type I 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGATA CGCGCCAATA CGTCCTCAAG CAGATAGAGG AGCGGGACAT CCGCTTCATC 
CGACTGTGGT TCACCGACAT GCTGGGCAAC CTGAAGAGCT TCGCCATCAC CCCGTCGGAT
GTGGACAGCG CCTTCCAAGA GGGCATAAGC TTCGACGGAA CGTCCATCGA AGGCATAGTG
CACGGCGCCC AGAACTCCGA CATGCTGGTG GTTCCCGACG CCTCCACCTT CCAAGTGCTG
CCGTGGCGTC CGTCCAACAA CGCCGTGGCA AGCATGTTCT GCAGCATCCG CACGCCCGAC
GGCGACCCTT CGCCGGGCGA CAGCCGCCAG GTTCTCATGC GCATGCTGCG CAAGGCCCAG
GACATGGGCT TCATCATGGA CGTCGGAACC GAGCTGGAAT ATTTCTACTT CAAGGACGCT
ACCGCGCCCG TACCCATCGA CGACGGCGGC TACTTCGACC TGACGCCGCT GGACAACGCC
TCTGACCTGC GCCGCGAAAC TATCCTCATG CTTGAGCAGA TGGGCATCCC GGTCGAGCGG
TCGCTGCACG AGAACGCCCC GTCGCAGCAT GAGATCGACC TTCATTACTC CGACGCCATG
ACCGCGGCGG ATGCCGTCAT GACCTCGCGC CTGGTGGTGA AGGAAGTGGC CTGCATGCAC
GGGGTCCACG CCTCGTTCAT GCCCAAGCCT CTGGAAAACG AGAACGGGTC GGCCATGTTC
ATCCATGAGT CGTTGCTGAC CGACGAGGGC AACGCGTTCT TCGATCTGAA CGACCCCGAC
GGGTACGGTC TTTCGCCTTT GGCCAAGCAC TACATCGCCG GCGTGCTCAA ATACGCCCCG
GAATACATGC TCATCACAAA CCAGTATGTG AACTCCTACA AGCGCCTGGT CTCGGGTTTC
GACGCGCCGA CCTATGCGGC CTGGGGCAAC AAGAACCGTT CCGCTTTCGT GCGCGTGCCC
CGCTCCAAAC CTCGCAAGGA AATGTCGGCC CGGGTGGAGA TACGCAACGT AGACTCCGCG
GCGAACCCGT ATTTGGCCAT CGCCGCCACG CTTGCCGCCG GGCTGAAGGG CATCGAGGAG
GAGCTTGTGC TGCAGCCGCC TGTGGAAGGC AACCGGCTTA CGCTGACGCC TGAAGAATAT
GCAACTTTGG ATGCGGTGGC TCTGCCAGGC GACCTCTCCC GCGCCGTTGA CGCCTTTGAA
CAATCCGAGC TCATGCACGA CGTGCTTGGC GACTACCTGC ATCGCGCCCT TGCGGATGCG
AAGCGTCGCG AGTGGGAGGA TTATCAGCGC CATGTGAGCT CCTGGGAGCT CAAGCGGTAT
CTGGCGAAGC TGTAG
 
Protein sequence
MIDTRQYVLK QIEERDIRFI RLWFTDMLGN LKSFAITPSD VDSAFQEGIS FDGTSIEGIV 
HGAQNSDMLV VPDASTFQVL PWRPSNNAVA SMFCSIRTPD GDPSPGDSRQ VLMRMLRKAQ
DMGFIMDVGT ELEYFYFKDA TAPVPIDDGG YFDLTPLDNA SDLRRETILM LEQMGIPVER
SLHENAPSQH EIDLHYSDAM TAADAVMTSR LVVKEVACMH GVHASFMPKP LENENGSAMF
IHESLLTDEG NAFFDLNDPD GYGLSPLAKH YIAGVLKYAP EYMLITNQYV NSYKRLVSGF
DAPTYAAWGN KNRSAFVRVP RSKPRKEMSA RVEIRNVDSA ANPYLAIAAT LAAGLKGIEE
ELVLQPPVEG NRLTLTPEEY ATLDAVALPG DLSRAVDAFE QSELMHDVLG DYLHRALADA
KRREWEDYQR HVSSWELKRY LAKL