Gene Shel_19820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_19820 
Symbol 
ID8395871 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2212404 
End bp2212781 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content61% 
IMG OID644986733 
ProductZn finger protein HypA/HybF (possibly regulating hydrogenase expression) 
Protein accessionYP_003144345 
Protein GI257064673 
COG category[R] General function prediction only 
COG ID[COG0375] Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) 
TIGRFAM ID[TIGR00100] hydrogenase nickel insertion protein HypA 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCATGAGC TCGGCATCAT AACAGGCGTT GTGGACAGCG TGTCTGCCGC AGCCAAACAG 
GCTGGGGCCA CGCGTGTATA CAAGGTGACC CTGTCTGTCG GCGCCATGAC CGAAGCCATC
GAAGATGCTT TGCATTTCGC ATTCGACGCC ATTACCGAGG ACGACCCCCT TCTCAAGGGG
TCCGAGCTGG ACGTCCACAT CATCCAGCCG AAAAGCCGCT GCACCGTCTG CGGACATGAG
TACGAGCATG ACAGGTTCCA GCAGGCCTGC CCCGAATGCG GGGGCTTCGG CCGGCTCATT
GCGGGCCGCG AGCTTCGGAT CGACAGCATC GAGGTTGAGA CGCCGGATGA TGACGGGAAA
CCGTCATCGG AAGGGTAG
 
Protein sequence
MHELGIITGV VDSVSAAAKQ AGATRVYKVT LSVGAMTEAI EDALHFAFDA ITEDDPLLKG 
SELDVHIIQP KSRCTVCGHE YEHDRFQQAC PECGGFGRLI AGRELRIDSI EVETPDDDGK
PSSEG