Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_19680 |
Symbol | |
ID | 8395857 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 2203723 |
End bp | 2204418 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644986719 |
Product | ABC-type cobalt transport system, permease component CbiQ |
Protein accession | YP_003144331 |
Protein GI | 257064659 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0619] ABC-type cobalt transport system, permease component CbiQ and related transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0554754 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.221391 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTCGCT CCCGCATCGA CATACGCGTT GCCATCCTGG TGGTGCTCCT CTATTCCGTC ACGCTTTTCT GGATTGATGG CTGGGCGGGC ATGGCGGCAT GCGCAACGAT GCTGGTCGCC TTCGCCATTG CGTTGCGCTG CGATGTTCGG CGTCTGCTTC TGGTAGGTAT CCCCCTGTAC GTCCTTCTCG CGTTCGTTGT GGTAGCGCAC ATCCCATCGG GCGTGGGGGA GGGTCTGTAC TACGCCTGCC GGATACTCCT TTTGACAGCC GGTGCCATAG CCATGGCCTC AGCCTACGAC AACAACGATT TCGCACGGGC CATCGCCTCC CTGCTTGCGC CCTTTCGCCA CCTCCGCGTG CCCGTGGACG ATTTCGCCAT GGCCGCATCT ATCGCCCTCC GGTTCATTCC CGTGAGCTAC GATGAGCTGC AGCGCGTCGC CTCGGCTCAA AAGTCGCGCG CCTCCCGCCT TGATACGGGC GGGCTGGTGG TTCGTCTGAA GGCTTGGGCC AACGTGTTCA TTCCCGTTAT AGTCGGGTTG TTCCGCCGTG CCGAGGTTCT TGCAGGTGCC ATGGACTCGC GTTGCTACGG GGCTGGGCCT CGCACGAGCC TGCAGGACCT GAGTTTGCGC CCTGTCGATG TTCTTTGCAT TGCGTTTGCG GCGCTTTGTT GCTTCGCGGT TGGATACTTC CTCTGA
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Protein sequence | MGRSRIDIRV AILVVLLYSV TLFWIDGWAG MAACATMLVA FAIALRCDVR RLLLVGIPLY VLLAFVVVAH IPSGVGEGLY YACRILLLTA GAIAMASAYD NNDFARAIAS LLAPFRHLRV PVDDFAMAAS IALRFIPVSY DELQRVASAQ KSRASRLDTG GLVVRLKAWA NVFIPVIVGL FRRAEVLAGA MDSRCYGAGP RTSLQDLSLR PVDVLCIAFA ALCCFAVGYF L
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