Gene Shel_19680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_19680 
Symbol 
ID8395857 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2203723 
End bp2204418 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content61% 
IMG OID644986719 
ProductABC-type cobalt transport system, permease component CbiQ 
Protein accessionYP_003144331 
Protein GI257064659 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0619] ABC-type cobalt transport system, permease component CbiQ and related transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0554754 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.221391 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTCGCT CCCGCATCGA CATACGCGTT GCCATCCTGG TGGTGCTCCT CTATTCCGTC 
ACGCTTTTCT GGATTGATGG CTGGGCGGGC ATGGCGGCAT GCGCAACGAT GCTGGTCGCC
TTCGCCATTG CGTTGCGCTG CGATGTTCGG CGTCTGCTTC TGGTAGGTAT CCCCCTGTAC
GTCCTTCTCG CGTTCGTTGT GGTAGCGCAC ATCCCATCGG GCGTGGGGGA GGGTCTGTAC
TACGCCTGCC GGATACTCCT TTTGACAGCC GGTGCCATAG CCATGGCCTC AGCCTACGAC
AACAACGATT TCGCACGGGC CATCGCCTCC CTGCTTGCGC CCTTTCGCCA CCTCCGCGTG
CCCGTGGACG ATTTCGCCAT GGCCGCATCT ATCGCCCTCC GGTTCATTCC CGTGAGCTAC
GATGAGCTGC AGCGCGTCGC CTCGGCTCAA AAGTCGCGCG CCTCCCGCCT TGATACGGGC
GGGCTGGTGG TTCGTCTGAA GGCTTGGGCC AACGTGTTCA TTCCCGTTAT AGTCGGGTTG
TTCCGCCGTG CCGAGGTTCT TGCAGGTGCC ATGGACTCGC GTTGCTACGG GGCTGGGCCT
CGCACGAGCC TGCAGGACCT GAGTTTGCGC CCTGTCGATG TTCTTTGCAT TGCGTTTGCG
GCGCTTTGTT GCTTCGCGGT TGGATACTTC CTCTGA
 
Protein sequence
MGRSRIDIRV AILVVLLYSV TLFWIDGWAG MAACATMLVA FAIALRCDVR RLLLVGIPLY 
VLLAFVVVAH IPSGVGEGLY YACRILLLTA GAIAMASAYD NNDFARAIAS LLAPFRHLRV
PVDDFAMAAS IALRFIPVSY DELQRVASAQ KSRASRLDTG GLVVRLKAWA NVFIPVIVGL
FRRAEVLAGA MDSRCYGAGP RTSLQDLSLR PVDVLCIAFA ALCCFAVGYF L