| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_19620 |
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| Symbol | |
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| ID | 8395851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 2197108 |
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| End bp | 2198202 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644986713 |
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| Product | geranylgeranyl pyrophosphate synthase |
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| Protein accession | YP_003144326 |
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| Protein GI | 257064654 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0263779 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTGTTG AAAACCCCAA CGCAGCGCTG CTGGAAGCGG AGCGCAGCAA ACGTATGGCT
GCAATCATGT CGGGAATTGC CAATCCGCCG AAGGACTTCG AAGAGTACCT CAATGTGTAC
GCGGACGCTG TGGGCGATTT GGTGAACACC TACATCCCCC AGGGCATGGT TGCAGATATG
GATTGCTATC TGTACGACCC GTTGCTGGCG TACAGCAAAA ACGGCGGCAA GCGCCACCGC
CCGCTTATCT GCCTGGCAGC CTGCGCAGCC GTGGGCGGCG ACGTCCGCAA GGCGTTGTCT
TCGGCGGCGG CTATCGAGCA CTTCCATACG GCGGCGCTCA TCCACGACGA CATCGCTGAC
GAGGCCACGC TTCGCCGCGG CGAGCCGTGC CTGCACCTCA CCTACGGCAT GGGGCTGGCC
ATTAACATGG GCGATTTGGG CTTGTCGCTG GTCAACGGCA CCGTCATGAA AGATCCGGCC
CTCGACGACC ACACCAAGGT CCGCGTCGTG ACCGAGCTCA TTGAGATGAC CCGTCGGACC
ATCGAGGGGC AGGCTATGGA CATCGGTTGG GCCCGTGACG AGCGCTACGA CATTTCGCCT
GAGAACTACC TGATCATGGC CACACACAAA ACCGCCCATT ACTCCGGTGC CGTACCGTTG
GCCATCGGCG CCATCGTCGG AGGGGCGACT GAAGGAGCAA TCGAGGCGCT GCGCAATTAC
GGTCTGGACA CCGGCCTTGC CTTCCAGATT CAGGACGACC TGCTCAACAT CGAAGGCGAC
CCGAATGTGG TAGGGAAGGA CTGGGGCAAC GACATCACCG AAGGCAAGCG CACACTCATG
GTGGTGCATG CCCTGCAGAA TTCGACGCAG CGCGATCGGC TGGTGGAAAT TCTCTCTTCG
AAGACCACCG ACCACGATGC ACTGGTCGAG GCCGTATCCA TCATGCGCGA ATCCGGTTCG
GTGGAATACG CGCGCAACTA TGCGGAAAAC CTCACGAGCA TAGCGAAGAA CCGACTGGTC
GATATGCTTG AGCCGAGCAC TGCACGCGAT CTGCTGCTTT CCATGGCCGA CTACTTCGTC
AACCGTCTCA AATAA
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| Protein sequence | MVVENPNAAL LEAERSKRMA AIMSGIANPP KDFEEYLNVY ADAVGDLVNT YIPQGMVADM
DCYLYDPLLA YSKNGGKRHR PLICLAACAA VGGDVRKALS SAAAIEHFHT AALIHDDIAD
EATLRRGEPC LHLTYGMGLA INMGDLGLSL VNGTVMKDPA LDDHTKVRVV TELIEMTRRT
IEGQAMDIGW ARDERYDISP ENYLIMATHK TAHYSGAVPL AIGAIVGGAT EGAIEALRNY
GLDTGLAFQI QDDLLNIEGD PNVVGKDWGN DITEGKRTLM VVHALQNSTQ RDRLVEILSS
KTTDHDALVE AVSIMRESGS VEYARNYAEN LTSIAKNRLV DMLEPSTARD LLLSMADYFV
NRLK
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