Gene Shel_19590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_19590 
Symbol 
ID8395848 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2193446 
End bp2194459 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content61% 
IMG OID644986710 
ProductABC-type metal ion transport system, ATPase component 
Protein accessionYP_003144323 
Protein GI257064651 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1135] ABC-type metal ion transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.197301 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00100295 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGATTGAAA TCAAGAACCT TAAGAAGGTG TGGGACGACG GGACCGTCAC CCTTAAGGAC 
ATCAACATCA CCATCGGCGA CGGCGACGTG TACGCCCTCG TCGGCCGAAG CGGTGCCGGC
AAGTCAACGC TGCTCCGCTG CATCAACGGC CTAACCTCCT ATCAGGAGGG CAGCATCAAG
GTGGACGGCC GCGAGGTCAA GGACATGAGC CCCAAAGAGC TCCGCGAGCT CCGCCGTCAT
GCAGGCATGA TCTTCCAGCA GTTCTCGCTT CTGGAGCGCG CGACGGTCTA CGACAATGTT
GCCTTGCCCA TGAAGTGCTG GAAGTATCCG AAGGAGGAGC AGCACGCGAA GGTGATGGAG
CTGCTCGAGC TCGTTGGCCT GGCGGACAAG AAGGACGCCA AGCCCCGCAA CCTCTCCGGC
GGACAGAAGC AGCGCGTCGC CATCGCCCGC GCCCTCACCA TGGAGACCAA GTATCTCCTG
TGCGACGAGG CCACCTCGGC GCTCGACCCC AAGACCACCA ACTCTATCCT GGATCTGCTG
CTCGAGATCA ACAGGAAGAC GGGCATCACC ATCATCATCG TGACGCACCA GATGGAGGTC
GTGCGCAAGG CCTGCCAGCG CGCCTGCATC CTGGAGCACG GCGTCATCAC GGCGGAGGGC
CCCGTGGAGG ACATCTTCTT CGACCGCCCC GACTCGCTGC TGCGGCTTTT GGGCGACGAG
CGCCAGACCC TGCCGAGCGA CGGGCACAAC CTGCGCATCT CCCATCTGGT GCAGACTCCC
GAAGACGGCA AGCTGCTGAA CCAGATGGCG TTCGACCTGG GCTACGTGTT CCCGATCCTC
GACGGCCAGA TCCTGGATTA CCGCGGACAG AACGTGGGCA TGTTCACCAT CAATGTGGAT
GACGAACATA TGCCAGCGGT CAGTCAGTAT TTGAACGCGC GCGATCTCGA ATGGCATGAG
ATAGAGATAC ATGATGAAGC GTCCGAAATC ATCGACGGAA GGGAAGGCGA ATAA
 
Protein sequence
MIEIKNLKKV WDDGTVTLKD INITIGDGDV YALVGRSGAG KSTLLRCING LTSYQEGSIK 
VDGREVKDMS PKELRELRRH AGMIFQQFSL LERATVYDNV ALPMKCWKYP KEEQHAKVME
LLELVGLADK KDAKPRNLSG GQKQRVAIAR ALTMETKYLL CDEATSALDP KTTNSILDLL
LEINRKTGIT IIIVTHQMEV VRKACQRACI LEHGVITAEG PVEDIFFDRP DSLLRLLGDE
RQTLPSDGHN LRISHLVQTP EDGKLLNQMA FDLGYVFPIL DGQILDYRGQ NVGMFTINVD
DEHMPAVSQY LNARDLEWHE IEIHDEASEI IDGREGE