Gene Shel_19360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_19360 
Symbol 
ID8395825 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2169232 
End bp2169972 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content58% 
IMG OID644986687 
Producthypothetical protein 
Protein accessionYP_003144301 
Protein GI257064629 
COG category[S] Function unknown 
COG ID[COG1434] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000354408 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGGCTATCG CTCTCGCAAT AGCAGGCATC GTCTGCATCG TATACGGCAT CACCATCATG 
GCCGCCTGGT CGGGCACGAT GTTCTTTGCC GTGTGGTATG CGATTGGATT CGCGCTCATT
CTTTGCGGCT GGGGCGTCCA TGCAGGAGCA TTCGACGCCC TGCCCCGCTT CGCCCATATA
TCCATAGCCG GCCTCAGCGT CGTGCTCATC GCAGGATTCC TTGTAGCTGC AGGCTGCTCG
CTCAGCGGAT TCGACGAGCA CGGGGAACCC GATCTGGATT GCATCGTGGT TCTGGGCGCC
CAGATGAAGG CCGACGGCCC AAGCATCGTG CTGCGCCTGC GGCTGGACGC CGCCTACGAC
TACCTTGTCG AAAACCCCGA GACGGTATGC ATCGTTTCGG GGGGACAAGG GCCCAACGAA
CCTATAACCG AAGCCGACGG GATGGCGGAT TACCTTATCG AACGAGGCAT CGACGAATCG
CGCATCATCC GCGAAAACAC GTCTACCAAC ACCGTGGAGA ACATCCGCAA CAGCTCAGCT
TTCTTCGATG CGGAACACGA CCGCGTAGGC ATCGTCACCA ACAACTTCCA CGTGTTCCGC
AGCGTACGCA TTGCACAAGC CCAAGGCGTG CAAAACGTAT GCGGCATCTC GGCCGATTCG
GTGGCTTGGT ATCTGCCGAA CAACATCCTT CGTGAATCGA TGGGCATCGC AAAAGACCTT
TTGAAAGGAA ACCTCGGCTG A
 
Protein sequence
MAIALAIAGI VCIVYGITIM AAWSGTMFFA VWYAIGFALI LCGWGVHAGA FDALPRFAHI 
SIAGLSVVLI AGFLVAAGCS LSGFDEHGEP DLDCIVVLGA QMKADGPSIV LRLRLDAAYD
YLVENPETVC IVSGGQGPNE PITEADGMAD YLIERGIDES RIIRENTSTN TVENIRNSSA
FFDAEHDRVG IVTNNFHVFR SVRIAQAQGV QNVCGISADS VAWYLPNNIL RESMGIAKDL
LKGNLG