| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_19240 |
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| Symbol | |
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| ID | 8395813 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 2157165 |
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| End bp | 2157689 |
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| Gene Length | 525 bp |
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| Protein Length | 174 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644986675 |
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| Product | 2'-5' RNA ligase |
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| Protein accession | YP_003144289 |
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| Protein GI | 257064617 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1514] 2'-5' RNA ligase |
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| TIGRFAM ID | [TIGR02258] 2'-5' RNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0390929 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGACGT TTATCGCCAT TGACCCGCCT GAAGCCTTCA TCGACGAAAC TGCCGATCTT
GCCCGATATC TGAAAACACG CATCGACGGA CGCTTTATTG CCAGAGAAGC ATATCACGTG
ACCCTGGCTT TCCTGGGCGA TGCCGATCAA CGGCAGATAG CCTCCGCCAT GGACGCGATA
GATGCCGTGG CGGATCGTGT ATCTCCGACT TTGTCGCCAG GCGGCTTGGG CGTATTCGGA
AAGCCCAAGG ATTGCACGCT GTACCTGGAG CTGCAAAAGG ACCCATCTCT TTTGACCCTA
TGCAAAGGCC TGCGGGAAGA GCTCGAAAGC CGCGACGTGC CCTTCGACAG CAAACCGTTT
CTTCCCCACG TGACGCTCGC GCGCAGGGCG CATGTACCTG ATGGGAATCT GGCAGGAATT
CCTTTTCCCA ACGCTTGTCG GGCCGATCGC GTCGTTCTGT TCAAGAGCGT TCTGACACCC
GAAGGGGCGA GCTACTCCCC TCTCTACGAA AGGGAGCTGG GCTAG
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| Protein sequence | MRTFIAIDPP EAFIDETADL ARYLKTRIDG RFIAREAYHV TLAFLGDADQ RQIASAMDAI
DAVADRVSPT LSPGGLGVFG KPKDCTLYLE LQKDPSLLTL CKGLREELES RDVPFDSKPF
LPHVTLARRA HVPDGNLAGI PFPNACRADR VVLFKSVLTP EGASYSPLYE RELG
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