Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_19190 |
Symbol | |
ID | 8395808 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 2152206 |
End bp | 2153816 |
Gene Length | 1611 bp |
Protein Length | 536 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 644986670 |
Product | GMP synthase (glutamine-hydrolyzing) |
Protein accession | YP_003144284 |
Protein GI | 257064612 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0519] GMP synthase, PP-ATPase domain/subunit |
TIGRFAM ID | [TIGR00884] GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit [TIGR00888] GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0538351 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGAAT CCACGTTTCC AGAGCAGAAG GTAGTCGTTC TCGATTTCGG TGCCCAGTAT GGCCAGCTGA TTGCTCGTCG CGTTCGCGAT TTAGGCGTGT TTTCGACCAT TGCTCCTTGT GACATTCCGG CCGAAGAGCT GGCGGACATG AAGCCTTCGG CAATCATTCT CTCCGGCGGT CCGGCGAGCG TGTATGCGGA AGACGCTCCC ACTATTGATC CCGCCGTGCT CGAACTGGGG GTTCCCGTGC TTGGATTCTG CTACGGCCAT CAGGTTATCG CCGTGACGCT CGGCGGTCGT GTTGGCCATA CCGAAAAGGG CGAATACGGC CATGCCGACA TCACCCGTTG CGACGGCGGC ACCAGCAAGC TGTTCGGGAG CACGCCCAGT CAGCAACAGG TATGGATGAG CCACCGCGAT GCGGTCATCC AAGTGCCCGA AGGGTTCCGC GTTACCTCCC AGACGGCAAT CTGCCCCGTT GCTTCCATGG AGTGCCCCGA TCGAAATCTA TACTCGACCC AGTTTCATCC TGAAGTGAGG CATACTCCCT ATGGCCAGGA TCTTCTGGGC AACTTCTTGT TCAACATCTG CGGATTGCAG CCCAACTGGA CCATGGAAGG CATCATCGAA GACTCGGTTC GTGCCATCCA GGAGCAAGTG GGGGATTCCC GTGTCATTTT GGGCCTGTCC GGCGGTGTCG ACTCGAGTGT CGTGGCCGCC CTGTGCGCCC GAGCTATCGG CAGCCGGTTG ACCTGCGTGT TCGTGAACCA CGGTTTGCTT CGCAAAAACG AGCCTGAAGA GGTTGAGGAG GTTTTCACCA AACAGTTCGA CGTCGACTTC GTGCACGTCC ATGCCGAGGA GCGGTATGCG GGCCTGCTTG CCGGGGTGGT TGACCCCGAG GAGAAACGCC GAATCATCGG CACCCAGTTC TGGAACGAAT TCTTCGCGGT AGCGCAGGAC ATCGCCGAAG ACGGGCGTCC CGTGCAGTTC ATGGCGCAGG GTACTATCTA TCCTGACATC ATCGAAAGCG GCGCTCGAAA GACCGGTGGC AAAGCCTCTA CCATCAAGAG CCATCACAAC CTGATTCCAT TTCCCGAAGG GGTTCATTTC GACCTGATTG AGCCGCTGGA CCACTTCTTC AAGGATGAGG TTCGTGCGCT GGGTACGGCT TTGGGCCTGC CCGACTATAT CGTGCACCGT CAGCCGTTCC CCGGACCTGG TCTGGCCATC CGCATCATCG GGGACGTGAC GCCTGAAAAG CTGGAAATCC TGAAAAATGC CGATGCGATT ATCCGCGAAG AGCTGGATGC GTACAACGCG AAGCTTTTCG AAGAGACGGG GGAGCGCAAC AGCGAGCATA GCTGCTGGCA GTATTTCGCC GTGCTTCCTG ACATCAAGAG CGTCGGTGTC ATGGGCGACG AACGTACGTA CCAGCGGCCG ATCATCCTTC GCGCAGTGGA ATCGAGCGAC GCGATGACGG CGGACTGGGC TAAGCTTCCT TATGAAGTGT TGGCGCGTGT CAGTGGCCGT ATCGTAGCCG AAGTTCCGGG TGTCAACAGG GTGTTGTACG ACATTACGTC CAAACCTCCC GCAACAATCG AGTGGGAGTA A
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Protein sequence | MNESTFPEQK VVVLDFGAQY GQLIARRVRD LGVFSTIAPC DIPAEELADM KPSAIILSGG PASVYAEDAP TIDPAVLELG VPVLGFCYGH QVIAVTLGGR VGHTEKGEYG HADITRCDGG TSKLFGSTPS QQQVWMSHRD AVIQVPEGFR VTSQTAICPV ASMECPDRNL YSTQFHPEVR HTPYGQDLLG NFLFNICGLQ PNWTMEGIIE DSVRAIQEQV GDSRVILGLS GGVDSSVVAA LCARAIGSRL TCVFVNHGLL RKNEPEEVEE VFTKQFDVDF VHVHAEERYA GLLAGVVDPE EKRRIIGTQF WNEFFAVAQD IAEDGRPVQF MAQGTIYPDI IESGARKTGG KASTIKSHHN LIPFPEGVHF DLIEPLDHFF KDEVRALGTA LGLPDYIVHR QPFPGPGLAI RIIGDVTPEK LEILKNADAI IREELDAYNA KLFEETGERN SEHSCWQYFA VLPDIKSVGV MGDERTYQRP IILRAVESSD AMTADWAKLP YEVLARVSGR IVAEVPGVNR VLYDITSKPP ATIEWE
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