Gene Shel_19190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_19190 
Symbol 
ID8395808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2152206 
End bp2153816 
Gene Length1611 bp 
Protein Length536 aa 
Translation table11 
GC content58% 
IMG OID644986670 
ProductGMP synthase (glutamine-hydrolyzing) 
Protein accessionYP_003144284 
Protein GI257064612 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0519] GMP synthase, PP-ATPase domain/subunit 
TIGRFAM ID[TIGR00884] GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit
[TIGR00888] GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0538351 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGAAT CCACGTTTCC AGAGCAGAAG GTAGTCGTTC TCGATTTCGG TGCCCAGTAT 
GGCCAGCTGA TTGCTCGTCG CGTTCGCGAT TTAGGCGTGT TTTCGACCAT TGCTCCTTGT
GACATTCCGG CCGAAGAGCT GGCGGACATG AAGCCTTCGG CAATCATTCT CTCCGGCGGT
CCGGCGAGCG TGTATGCGGA AGACGCTCCC ACTATTGATC CCGCCGTGCT CGAACTGGGG
GTTCCCGTGC TTGGATTCTG CTACGGCCAT CAGGTTATCG CCGTGACGCT CGGCGGTCGT
GTTGGCCATA CCGAAAAGGG CGAATACGGC CATGCCGACA TCACCCGTTG CGACGGCGGC
ACCAGCAAGC TGTTCGGGAG CACGCCCAGT CAGCAACAGG TATGGATGAG CCACCGCGAT
GCGGTCATCC AAGTGCCCGA AGGGTTCCGC GTTACCTCCC AGACGGCAAT CTGCCCCGTT
GCTTCCATGG AGTGCCCCGA TCGAAATCTA TACTCGACCC AGTTTCATCC TGAAGTGAGG
CATACTCCCT ATGGCCAGGA TCTTCTGGGC AACTTCTTGT TCAACATCTG CGGATTGCAG
CCCAACTGGA CCATGGAAGG CATCATCGAA GACTCGGTTC GTGCCATCCA GGAGCAAGTG
GGGGATTCCC GTGTCATTTT GGGCCTGTCC GGCGGTGTCG ACTCGAGTGT CGTGGCCGCC
CTGTGCGCCC GAGCTATCGG CAGCCGGTTG ACCTGCGTGT TCGTGAACCA CGGTTTGCTT
CGCAAAAACG AGCCTGAAGA GGTTGAGGAG GTTTTCACCA AACAGTTCGA CGTCGACTTC
GTGCACGTCC ATGCCGAGGA GCGGTATGCG GGCCTGCTTG CCGGGGTGGT TGACCCCGAG
GAGAAACGCC GAATCATCGG CACCCAGTTC TGGAACGAAT TCTTCGCGGT AGCGCAGGAC
ATCGCCGAAG ACGGGCGTCC CGTGCAGTTC ATGGCGCAGG GTACTATCTA TCCTGACATC
ATCGAAAGCG GCGCTCGAAA GACCGGTGGC AAAGCCTCTA CCATCAAGAG CCATCACAAC
CTGATTCCAT TTCCCGAAGG GGTTCATTTC GACCTGATTG AGCCGCTGGA CCACTTCTTC
AAGGATGAGG TTCGTGCGCT GGGTACGGCT TTGGGCCTGC CCGACTATAT CGTGCACCGT
CAGCCGTTCC CCGGACCTGG TCTGGCCATC CGCATCATCG GGGACGTGAC GCCTGAAAAG
CTGGAAATCC TGAAAAATGC CGATGCGATT ATCCGCGAAG AGCTGGATGC GTACAACGCG
AAGCTTTTCG AAGAGACGGG GGAGCGCAAC AGCGAGCATA GCTGCTGGCA GTATTTCGCC
GTGCTTCCTG ACATCAAGAG CGTCGGTGTC ATGGGCGACG AACGTACGTA CCAGCGGCCG
ATCATCCTTC GCGCAGTGGA ATCGAGCGAC GCGATGACGG CGGACTGGGC TAAGCTTCCT
TATGAAGTGT TGGCGCGTGT CAGTGGCCGT ATCGTAGCCG AAGTTCCGGG TGTCAACAGG
GTGTTGTACG ACATTACGTC CAAACCTCCC GCAACAATCG AGTGGGAGTA A
 
Protein sequence
MNESTFPEQK VVVLDFGAQY GQLIARRVRD LGVFSTIAPC DIPAEELADM KPSAIILSGG 
PASVYAEDAP TIDPAVLELG VPVLGFCYGH QVIAVTLGGR VGHTEKGEYG HADITRCDGG
TSKLFGSTPS QQQVWMSHRD AVIQVPEGFR VTSQTAICPV ASMECPDRNL YSTQFHPEVR
HTPYGQDLLG NFLFNICGLQ PNWTMEGIIE DSVRAIQEQV GDSRVILGLS GGVDSSVVAA
LCARAIGSRL TCVFVNHGLL RKNEPEEVEE VFTKQFDVDF VHVHAEERYA GLLAGVVDPE
EKRRIIGTQF WNEFFAVAQD IAEDGRPVQF MAQGTIYPDI IESGARKTGG KASTIKSHHN
LIPFPEGVHF DLIEPLDHFF KDEVRALGTA LGLPDYIVHR QPFPGPGLAI RIIGDVTPEK
LEILKNADAI IREELDAYNA KLFEETGERN SEHSCWQYFA VLPDIKSVGV MGDERTYQRP
IILRAVESSD AMTADWAKLP YEVLARVSGR IVAEVPGVNR VLYDITSKPP ATIEWE