| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_19090 |
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| Symbol | |
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| ID | 8395798 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 2142309 |
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| End bp | 2145323 |
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| Gene Length | 3015 bp |
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| Protein Length | 1004 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644986660 |
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| Product | helicase, type I site-specific restriction-modification system restriction subunit |
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| Protein accession | YP_003144274 |
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| Protein GI | 257064602 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0610] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.210967 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGCAAG TCACCTACAT GGCGGTTGGA CTGCCGAAGA CGACGGAGAA AAACTTCGAG
AACAACGTCG AGTCGATGAT GCACGATGCC GGATGGGACG TGTTCGAAAG CAACGCTGAG
GCTCAAGCCG ACTACGACCG CAAACGGGCG CTGAAGACCA AATCGGTCCT CGGCTTCGTA
AAGGAAACCC AGCCCGAAGA GTGGGCGAAG ATCGAGAAAA TGTACGGCGC TAAGGCCGAG
GAGCGCTTCC TGAAGCGCCT CTGCGACGAG CTGGAACCGC ACGATGAACG GGGCGGCGTT
GTGAACGTGC TCCGCCACGG CATAAGGATG GCGCCGGGCG CGCAGTTCCG CCTATGCTTC
TTCAAACCGG CGACAGGCAA GAACCCAGAC GCCATCGCCC GCTACGAGGC GAACCGCTTC
GAACTCGTGA GGCAGCTGCG CTACGGTACG CTGCCCGACG ACAAAGACAA CTCGGTGGAC
ACCGTGCTCT TCCTGAACGG CATCCCCGTG GCGACCATGG AGTTGAAGAA CAACCTCTCC
GGCCAACGGA CCGACCACGC CGTGAAGCAG TACAAGACCG ACCGCAGCCC GAAGGAGCTG
CTGTTCAAGC CGAACCGTCG CGCTATCGTG CACTTCGCGC TCGATTCCGA GACAGTCGAG
ATGTGCACGT GGCTCGCCAA CGGCAAGTCG TACTTCCTGC CTTTCAACAG AGGCAACGGC
ATGAGCGGCG CGGGCAACCC GCCGAACCCG AACGGCTACC GCACTGAGTA CCTGTACCGA
GAGATCCTCG AGACCGATTC GCTCCTCGAC ATCATCCAGC GCTTCGTGCG CGTGGAGTAC
GATGCGGACA CTCATGCGAT GAAGAAGATC ATCTTCCCGC GCTACCATCA GCTCGACGCC
GTACGCAAGC TCGTCGCGGA CGCCAAAGCG AGCGGGGCCG GCAAGAGCTA CCTAATCCAG
CACTCGGCGG GCTCGGGCAA GTCGAACTCC ATCGCATGGC TGGCTCACCA CCTGCAGTCG
CTGCACGACG CCGGCGACAA CCCGGTGTTC GACACCGTTG TCATATTGAC CGACCGACGC
AACCTGGACG CCCAGCTCTC AGAGACGATC GACTCGGTCG AGCACAAGCG CGGCGTCGTG
GTGCGCATCC GCGAGGAGGA TGGCTCGGCA GGCCTCAAGG AGGCTCTGAA CTCGGGTGCG
CAGATAATCA CGTCGACCAT CCAGAAGTTC CCCTACATCT GCTCTGAGAC GAAGGTCTCC
GGCCGCAGGT TCGCAGTCAT CATCGACGAA GCGCACTCAT CGCAGTCCGG CAAGGCGAAC
GCCAAGATGA AGATGGCGCT CATCGACCGC GACTTGGATC CCGATGAGCC GTGGGACGAC
GAGGACGAGC TCGCCAAGGA GATGAAGGCG CAGGGCAAGA TCCCCAACCT GAGCTTCTTC
GCGTTCACGG CCACGCCCAA GGCGGCCACG CTCGAGGTCT TCGGCACCCG CGACGACGAG
TGCAAACGCG ACGAGAACGG CATGCTCATC CCGCGGCCGT TCCATCTTTA CAGCATGAAG
CAGGCCATCG ACGAGGGCTT CATCCTGGAC GTGCTGGAGA ACTACACCTG CTTCGAGAGC
TACTTCAAGC TGGTGAAGAC CATCGCCGAC GACCCCAAGT ACAAGGAGAT GAAGGCCAAC
CGCGCCCTCA TGGGCATCGC CGAGTGGAGT CCGGCCATGG TCGACCGCAA GGCGCAGATC
ATCGTCGAGC ACTTTATGAA CGACGTGGAG GGCGTGCTCG GCGGGAAATC GAAGGCCATG
GTCGTTACCT GGAGCCGCCC GATGGCATAC CGCCTGTACC GAGCGATGGC CGACTACATC
GCCCGGGAGC GCTACGCGTG CGAGATCATG GTGGCTTTCT CGGGCAAGCT CGAGGTCGAC
GGCGAGGAGC TCACCGAGGC GAGCATTAAC GGCGTACCGG AATCCCGAAC GGCCGAGCTC
TTCGACTCCG ACGAGAAGCG CATCATCGTG TGCGCGAACA AGTTTCAGAC AGGCTTCGAC
CAGCCCAAGC TTTGCGCCAT GTACGTGGAC AAGATGCTCA CAGGTGTGGC GGCGGTGCAG
ACGCTCAGCC GTCTAAACCG CACGTGTTCG ATCCCCGGCA AGCGCACGTT CGTGCTCGAC
TTCGCTAACA CGTGGGACAC GATCCGAGCG AGCTTCGCGA ACTACTACGA GGCCACCGAG
CTCGATGCCG CGACCGACCC AGACGTCATC TACAACCTGG CGAGCAGGCT TGATGATTAC
CACGTGTACG AGACCTCCGA GGTCGAGGCC GTGGCGGACG CCTACTTCGG CGAGCCCGAC
CCCGATAAGG TGTTGATGAA GGTGGAGGCG AGGCTGCAGC CCGCCGTCGA CCGCTGGAAG
GCGAAGGACG ACACGAAGAA ACGCGAGTTC AAGGCGCTGC TACGCAAGTT CCTACGCTCG
TACTCGTTCA TCACGCAGAT GGTGAGGCTC GGCGACGAGG ATCTGCACAG GCTCTTCGTA
TACGGCGGGT TCCTAGTCAA GAAGCTCTTC CTCGAGACCG GCGACACCCC TGACCTTCGT
GACAAGGTGG AGCTGGAGTA CCTCCGCATC GAGGACAAGG GCACCCAGGC CATCAAGCTG
CAGAGTGAGC AGCTGCACAA CGGCGGTGCT AACGCCGGCA TTGCCAAGGA GGAGGAAGAG
GAGCGCCTGA GCGTGCTCAT CGATCACCTC AACGAGGTCT TCGGCACCGA GTGGGAGGAC
GCCGACAAGA TCATCAAGGC GTGCGCCGAC AAGATCTGCG AGGACGAGGA CTTCGTGGCC
AAAGCGCGAA CCAACACAAT GGGCGACCTG CGGGCGATCT TCGGAGGTGT GATGATGGAT
GCGCTCGCCG CGATCTTGTC AGACAGCCAG GACATGTTCG AGAAGTTCAG CGAGAACCCC
GACGCTTTCA TGCGTGTGAT GGACGACGAG CTGCTGCCAA TCGTGTACCG AAGGTGCAAC
GCAGATGTTC AATAG
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| Protein sequence | MEQVTYMAVG LPKTTEKNFE NNVESMMHDA GWDVFESNAE AQADYDRKRA LKTKSVLGFV
KETQPEEWAK IEKMYGAKAE ERFLKRLCDE LEPHDERGGV VNVLRHGIRM APGAQFRLCF
FKPATGKNPD AIARYEANRF ELVRQLRYGT LPDDKDNSVD TVLFLNGIPV ATMELKNNLS
GQRTDHAVKQ YKTDRSPKEL LFKPNRRAIV HFALDSETVE MCTWLANGKS YFLPFNRGNG
MSGAGNPPNP NGYRTEYLYR EILETDSLLD IIQRFVRVEY DADTHAMKKI IFPRYHQLDA
VRKLVADAKA SGAGKSYLIQ HSAGSGKSNS IAWLAHHLQS LHDAGDNPVF DTVVILTDRR
NLDAQLSETI DSVEHKRGVV VRIREEDGSA GLKEALNSGA QIITSTIQKF PYICSETKVS
GRRFAVIIDE AHSSQSGKAN AKMKMALIDR DLDPDEPWDD EDELAKEMKA QGKIPNLSFF
AFTATPKAAT LEVFGTRDDE CKRDENGMLI PRPFHLYSMK QAIDEGFILD VLENYTCFES
YFKLVKTIAD DPKYKEMKAN RALMGIAEWS PAMVDRKAQI IVEHFMNDVE GVLGGKSKAM
VVTWSRPMAY RLYRAMADYI ARERYACEIM VAFSGKLEVD GEELTEASIN GVPESRTAEL
FDSDEKRIIV CANKFQTGFD QPKLCAMYVD KMLTGVAAVQ TLSRLNRTCS IPGKRTFVLD
FANTWDTIRA SFANYYEATE LDAATDPDVI YNLASRLDDY HVYETSEVEA VADAYFGEPD
PDKVLMKVEA RLQPAVDRWK AKDDTKKREF KALLRKFLRS YSFITQMVRL GDEDLHRLFV
YGGFLVKKLF LETGDTPDLR DKVELEYLRI EDKGTQAIKL QSEQLHNGGA NAGIAKEEEE
ERLSVLIDHL NEVFGTEWED ADKIIKACAD KICEDEDFVA KARTNTMGDL RAIFGGVMMD
ALAAILSDSQ DMFEKFSENP DAFMRVMDDE LLPIVYRRCN ADVQ
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