Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_19070 |
Symbol | |
ID | 8395796 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 2139159 |
End bp | 2140436 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 644986658 |
Product | hypothetical protein |
Protein accession | YP_003144272 |
Protein GI | 257064600 |
COG category | [V] Defense mechanisms |
COG ID | [COG0732] Restriction endonuclease S subunits |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0871344 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACGCT ACGAGGCGTA TAAGGATTCT GGAGTTGAGT GGATTGGCGA GATACCCTCT ACATGGACTT TAGCCAGGAC GAAAGCAGTG TTCAGCAGTA AGAAACGCGT TGTTGGCGAT AAGGCTAATG AATATCAGCG CCTTGCACTA ACAATGCATG GCGTATTACT GCGCGATAAA GATGACAACG AAGGACTTCA GCCGGAGCAA TTTGAGGGTT ACCAAATACT TGAAGCTAAT GAATTGGTAT TCAAATTAAT AGACTTGGAA AACATTAAAA CAAGCCGTGT TGGCCTTTCG CCGTATACGG GTATTGTTTC ACCTGCATAT ATAACGCTTA CGCAAACGGA TTCCGACAAT AGGTACTTCT ATTATTGGTT CTTCGCGCTA TATCAGCAAA ACGTGTTCAA CCAATTAGGT GGCAATGGTG TCCGGAGTGC GCTCAACAAA GATGATCTTT TGAACCTTCC GATGCTCCTG CCAAAACAGG ACGAGCAGCG GGCCATCGCC AACTACCTCG ACGCCAGGAC CGCCGAGATC GACGCGCTCG TTGCGGACTG CGAGCGGGAG GCCGAGCTGC TGCGGGAGTA CCGCAAGGCG GTCATCTCCG AGGCCGTCAC CAAGGGCCTC GACCCCGACG CGCCCATGAA GGACTCCGGC GTAGAATGGA TCGGTGAGAT TCCGGAGGGG TGGCTAGTAC GTCCGTCTAA GACGTTGTTT GCCGAGGCGA AAGAGCTGCG ACACTCCGAT GACGAGCAGT GTGCTGCTAC GCAGAAATAC GGAATTATCC CTCAGGCTCG GTATATTGCC ATCGAGAATC AACGTATGGT AGTTGCTGAT AAGAACCTTG ATGCGTGGAA GCACGTTGAG CCAGGGGACT TTGTTATTAG CCTTCGTAGT TTTCAGGGTG GCTTGGAGCT GAGCGAAATT ACAGGGTGTG TCACTTGGCA CTACATTGTG CTTAAAGGAA ATGACTTAGT TGAAGCGGGA TATTTCAAGT ATTTGTTTAA GACAACGAAA TACATAGAGT CGCTTCAAAG GACGTGTACG TATATACGAG ATGGGCAAGA TTTGCGGTAT TCGAATTTTG TGCAGGTTCC ATTGCCCTTA CCGTCCAGAG AAGAGCAGGT CGCAATTGGT GTCTACCTCG ACGCCAAAAC CGCCGAAATC GATGCCCTTA TCGAGGCCAA GCAAACCATG GCCGACAAGC TGCGGGAGTA CCGCAAGTCG CTGATATCCG AGGCGGTCAC GGGTAAGTTC AAGGTCCCCG GCGTCTAG
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Protein sequence | MERYEAYKDS GVEWIGEIPS TWTLARTKAV FSSKKRVVGD KANEYQRLAL TMHGVLLRDK DDNEGLQPEQ FEGYQILEAN ELVFKLIDLE NIKTSRVGLS PYTGIVSPAY ITLTQTDSDN RYFYYWFFAL YQQNVFNQLG GNGVRSALNK DDLLNLPMLL PKQDEQRAIA NYLDARTAEI DALVADCERE AELLREYRKA VISEAVTKGL DPDAPMKDSG VEWIGEIPEG WLVRPSKTLF AEAKELRHSD DEQCAATQKY GIIPQARYIA IENQRMVVAD KNLDAWKHVE PGDFVISLRS FQGGLELSEI TGCVTWHYIV LKGNDLVEAG YFKYLFKTTK YIESLQRTCT YIRDGQDLRY SNFVQVPLPL PSREEQVAIG VYLDAKTAEI DALIEAKQTM ADKLREYRKS LISEAVTGKF KVPGV
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