Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_19060 |
Symbol | |
ID | 8395795 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 2137396 |
End bp | 2139156 |
Gene Length | 1761 bp |
Protein Length | 586 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644986657 |
Product | type I restriction-modification system methyltransferase subunit |
Protein accession | YP_003144271 |
Protein GI | 257064599 |
COG category | [V] Defense mechanisms |
COG ID | [COG0286] Type I restriction-modification system methyltransferase subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0947092 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCATT CCGAGATTTC AAGTTTTATT TGGGGCACTG CGGACCTCCT ACGCTCCAGC TTCAAGCAGC ATGAATACGG CGACATCATC CTTCCCTTCA CGGTGATGCG ACGCTTGGAC GTCGTACTAG AGCCAACCAA GCAAGCGGTG CTTGAAGCGG CTGCGAAGAA AATGCCCGAC GCGCTACGAG ACACGATGCT CAAGAAGGCG GCAGGGGTCG ACTTCTACAA CACGAGCGAG TTCACGATGC GCGGGCTCCT GTCCGACGCC GACGGCATCC GCGAGAATCT GACCAAGTAC GTCACGTCTT TCTCGCCCGA GATCGCTGAC ATCTTCGACA AGTTCAAGAT CTTCGACGTG ATAAAGGACC TCGACGACAA CGACCTGCTG TTCCTAGTGG TCGAGCGCTT CTGCAACCCG AGAATCGACC TCAGCCCCGC CTCCATCAGC AATGCCGACA TGGGCGACAT CTACGAGGAA CTAATTCGGC GCTTCTCCGA GGTATCCAAC GAGACGGCCG GCGAGCACTT CTCCCCGCGC GACGGCCTGC GCCTGGCGGC GGAGCTGCTG GTTGTCGGCG AGATGGATGA CCTCACCCAG CCGAACCGCA TCGTGAAGGT CTGCGACCCT TGCGCCGGGA CCGGCGGCGC ACTCACGGTG TTCGCCGACC GCGTAGCCGA GATAAACCCG CAGGCAACCG TCGTCACCTA CGCACAGGAG ATCAACGGAC AGTCCTACGC CATTTGCAAG TCAGACACCA TACTCAAGGG CGGCAACATC GCAAACGTTC ACCTGGGCGA TACGCTGGCG GACGACCAGA TGCCCGGTGA GACGTTCGGC TACCAGATAT CGAATCCGCC CTACGGCGTC GATTGGAAGA AGTCGCAGGC TGCGGTGCGC AAGGAGCACG AGCAGCTTGG CTTCGCGGGC CGCTTCGGCG CGGGCCTTCC GCGCATCTCT GACGGGCAGC TGCTCTTCGT GCAGCACATG GTCGCCAAGA TGCGGCCCGT TGACGAGGGC GGTGGCCGCA TCGCTGTGTT CCTCAACGGC AGCCCGCTCT TCACGGGAGC TGCCGGCTCG GGCGAGAGCG AGGTGCGCCG CTATCTCCTG CAACACGACC TGGTTGAGGC CATCGTAGCC ATGCCGAACG ACTTCTTCTT CAACACGGGC ATCGCCACCT ACATCTGGGT GCTCGACAAC ACCAAGGAGC CCCGCCGCAA GGGCAAGGTG CAGCTCATCA ACGCGAACGG CATCTACACG AAGATGCGCA AGAGCCTGGG CAGCAAGCGC AACGAGTTCA CCGACGAGCA GATTGCGCAG ATCGTCGGCC TGTACAACGA TTTTGAGGAC GCCGACCCGA AGCTGTCCAA GGTGTTCGCG AACGAGGAGT TCGGCTACGT GACCGTCGAC GTGCGCCGCC CGCAGCGCGA CGAGCGAGGT GAAATCGTGC GCGACAAGAA GGGCCGCCCC GTGGCGGACA AGGAGCTCAA CGATACCGAG AACATCCCTC TGACGCAGGA CGTGGACGAA TACATGGCCC GCGAGGTGCT GCCCTACGCG CCCGATGCCT GGATAGAGCC GCGCAAGCAG AAGAAGGGCC AGCTGCTCGA GCTCAAGGAC GGCGGCACCG TCGGCTTCGA GATCCCCTTC ACCAGGCACT TCTATGAGTA CACGCCGCTT CGCCCCAGCT CCGAGATCTT CGCCGAGATA CGCGAGCTCG AAGCGAGCAT TGCTGAGAAA CTCCGGAAAG CGGGGCTGTA G
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Protein sequence | MNHSEISSFI WGTADLLRSS FKQHEYGDII LPFTVMRRLD VVLEPTKQAV LEAAAKKMPD ALRDTMLKKA AGVDFYNTSE FTMRGLLSDA DGIRENLTKY VTSFSPEIAD IFDKFKIFDV IKDLDDNDLL FLVVERFCNP RIDLSPASIS NADMGDIYEE LIRRFSEVSN ETAGEHFSPR DGLRLAAELL VVGEMDDLTQ PNRIVKVCDP CAGTGGALTV FADRVAEINP QATVVTYAQE INGQSYAICK SDTILKGGNI ANVHLGDTLA DDQMPGETFG YQISNPPYGV DWKKSQAAVR KEHEQLGFAG RFGAGLPRIS DGQLLFVQHM VAKMRPVDEG GGRIAVFLNG SPLFTGAAGS GESEVRRYLL QHDLVEAIVA MPNDFFFNTG IATYIWVLDN TKEPRRKGKV QLINANGIYT KMRKSLGSKR NEFTDEQIAQ IVGLYNDFED ADPKLSKVFA NEEFGYVTVD VRRPQRDERG EIVRDKKGRP VADKELNDTE NIPLTQDVDE YMAREVLPYA PDAWIEPRKQ KKGQLLELKD GGTVGFEIPF TRHFYEYTPL RPSSEIFAEI RELEASIAEK LRKAGL
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