Gene Shel_19060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_19060 
Symbol 
ID8395795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2137396 
End bp2139156 
Gene Length1761 bp 
Protein Length586 aa 
Translation table11 
GC content62% 
IMG OID644986657 
Producttype I restriction-modification system methyltransferase subunit 
Protein accessionYP_003144271 
Protein GI257064599 
COG category[V] Defense mechanisms 
COG ID[COG0286] Type I restriction-modification system methyltransferase subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0947092 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCATT CCGAGATTTC AAGTTTTATT TGGGGCACTG CGGACCTCCT ACGCTCCAGC 
TTCAAGCAGC ATGAATACGG CGACATCATC CTTCCCTTCA CGGTGATGCG ACGCTTGGAC
GTCGTACTAG AGCCAACCAA GCAAGCGGTG CTTGAAGCGG CTGCGAAGAA AATGCCCGAC
GCGCTACGAG ACACGATGCT CAAGAAGGCG GCAGGGGTCG ACTTCTACAA CACGAGCGAG
TTCACGATGC GCGGGCTCCT GTCCGACGCC GACGGCATCC GCGAGAATCT GACCAAGTAC
GTCACGTCTT TCTCGCCCGA GATCGCTGAC ATCTTCGACA AGTTCAAGAT CTTCGACGTG
ATAAAGGACC TCGACGACAA CGACCTGCTG TTCCTAGTGG TCGAGCGCTT CTGCAACCCG
AGAATCGACC TCAGCCCCGC CTCCATCAGC AATGCCGACA TGGGCGACAT CTACGAGGAA
CTAATTCGGC GCTTCTCCGA GGTATCCAAC GAGACGGCCG GCGAGCACTT CTCCCCGCGC
GACGGCCTGC GCCTGGCGGC GGAGCTGCTG GTTGTCGGCG AGATGGATGA CCTCACCCAG
CCGAACCGCA TCGTGAAGGT CTGCGACCCT TGCGCCGGGA CCGGCGGCGC ACTCACGGTG
TTCGCCGACC GCGTAGCCGA GATAAACCCG CAGGCAACCG TCGTCACCTA CGCACAGGAG
ATCAACGGAC AGTCCTACGC CATTTGCAAG TCAGACACCA TACTCAAGGG CGGCAACATC
GCAAACGTTC ACCTGGGCGA TACGCTGGCG GACGACCAGA TGCCCGGTGA GACGTTCGGC
TACCAGATAT CGAATCCGCC CTACGGCGTC GATTGGAAGA AGTCGCAGGC TGCGGTGCGC
AAGGAGCACG AGCAGCTTGG CTTCGCGGGC CGCTTCGGCG CGGGCCTTCC GCGCATCTCT
GACGGGCAGC TGCTCTTCGT GCAGCACATG GTCGCCAAGA TGCGGCCCGT TGACGAGGGC
GGTGGCCGCA TCGCTGTGTT CCTCAACGGC AGCCCGCTCT TCACGGGAGC TGCCGGCTCG
GGCGAGAGCG AGGTGCGCCG CTATCTCCTG CAACACGACC TGGTTGAGGC CATCGTAGCC
ATGCCGAACG ACTTCTTCTT CAACACGGGC ATCGCCACCT ACATCTGGGT GCTCGACAAC
ACCAAGGAGC CCCGCCGCAA GGGCAAGGTG CAGCTCATCA ACGCGAACGG CATCTACACG
AAGATGCGCA AGAGCCTGGG CAGCAAGCGC AACGAGTTCA CCGACGAGCA GATTGCGCAG
ATCGTCGGCC TGTACAACGA TTTTGAGGAC GCCGACCCGA AGCTGTCCAA GGTGTTCGCG
AACGAGGAGT TCGGCTACGT GACCGTCGAC GTGCGCCGCC CGCAGCGCGA CGAGCGAGGT
GAAATCGTGC GCGACAAGAA GGGCCGCCCC GTGGCGGACA AGGAGCTCAA CGATACCGAG
AACATCCCTC TGACGCAGGA CGTGGACGAA TACATGGCCC GCGAGGTGCT GCCCTACGCG
CCCGATGCCT GGATAGAGCC GCGCAAGCAG AAGAAGGGCC AGCTGCTCGA GCTCAAGGAC
GGCGGCACCG TCGGCTTCGA GATCCCCTTC ACCAGGCACT TCTATGAGTA CACGCCGCTT
CGCCCCAGCT CCGAGATCTT CGCCGAGATA CGCGAGCTCG AAGCGAGCAT TGCTGAGAAA
CTCCGGAAAG CGGGGCTGTA G
 
Protein sequence
MNHSEISSFI WGTADLLRSS FKQHEYGDII LPFTVMRRLD VVLEPTKQAV LEAAAKKMPD 
ALRDTMLKKA AGVDFYNTSE FTMRGLLSDA DGIRENLTKY VTSFSPEIAD IFDKFKIFDV
IKDLDDNDLL FLVVERFCNP RIDLSPASIS NADMGDIYEE LIRRFSEVSN ETAGEHFSPR
DGLRLAAELL VVGEMDDLTQ PNRIVKVCDP CAGTGGALTV FADRVAEINP QATVVTYAQE
INGQSYAICK SDTILKGGNI ANVHLGDTLA DDQMPGETFG YQISNPPYGV DWKKSQAAVR
KEHEQLGFAG RFGAGLPRIS DGQLLFVQHM VAKMRPVDEG GGRIAVFLNG SPLFTGAAGS
GESEVRRYLL QHDLVEAIVA MPNDFFFNTG IATYIWVLDN TKEPRRKGKV QLINANGIYT
KMRKSLGSKR NEFTDEQIAQ IVGLYNDFED ADPKLSKVFA NEEFGYVTVD VRRPQRDERG
EIVRDKKGRP VADKELNDTE NIPLTQDVDE YMAREVLPYA PDAWIEPRKQ KKGQLLELKD
GGTVGFEIPF TRHFYEYTPL RPSSEIFAEI RELEASIAEK LRKAGL