| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_18950 |
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| Symbol | |
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| ID | 8395784 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 2125279 |
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| End bp | 2126949 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644986646 |
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| Product | cell wall-associated hydrolase, invasion-associated protein |
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| Protein accession | YP_003144260 |
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| Protein GI | 257064588 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.10475 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGCGA AGGACGTCGC ATACGAGACC CACGCGCCGA CGCTCGCGTC CGACGCCGCA
TCGGCGGCAA GGGACGCGGG AGAGGCAGCG CGCACGGGCA GGACAGACGC CGTATCCGCG
GGCATCGTCC GCGCGTCCGA AAGGCGCGAG TTCGGGGCGA AAACGGCCGG CAGACCGCCC
GCAACTCCAT CGAAACAGCA GGTCGGCGCT GCAAAGGCGT CGAAGTCAAA GCTGGATTTG
ACCTCAGAGG AGCAATCCAG GACGGCATTG CACAGGGCGA CCGGAGCGGC ATACGCGGGC
GCCGCATCGG TCGCGAGGGC GGCCGACGGG ACAGACGACG GCGACGAGGA CGAGAGCGTC
GCCTACCCGC CGTCGAGGAG GCCGGCATCG GCCAGGGCGG CGGAGCACGC GGCAGACGCC
AAGGAAGCGG CAGTGGCTGA TCAGCAACAA GCCGCCCGGG CCTCCGCCGC GAAGCACGCC
GACAAGGCGC GGTCCGCGGG CAAGGCGGGA AAGGCCGCCA AGGCCGACCG CGAGCGAAGG
AGGGCATCGG CCGCGAAGGC GCGCATGCAG TCGAGGCGGA CGTGGCTCAA GGCGCGCGCG
TCCCAGGAGG CGCAGGCGAA GGCAGCGGGC ACCGTCGCGA AGAAGGGGGT GCGGGCCAGG
CTAGCCGTCG CGGCGTCGTC GATGGCGGCG CCGGCTGCGG GCGCGCTCGC GGGGATCCTG
TTCTTCGTGC TCGCCGCAAT CCTCGTCTCG CAGCTCGTGA GCGCGCTGTT CGGCTTCTGG
GACAACGAGG CCAGGGCCCA GGCGGTCGAG GGCCTTCCGC CCTACATAAC CGCCGACATG
GTCGAGGCGG CGCTCGAGTG CCAGGAGCAG TACGGCCACC CGGCCGGATG CACGCTCGCG
CAGATCATCT GCGAGTCGGG CCAGGGAGAC CACCTGTCGG GGCTCGCCAC CCAGGACAAC
AACCTCTTCG GCATCAAGTG GGCGGCTAGC TTCGCCTCGT GCCCCGAGGT GTCGGGCAAG
TCGTCATGGT CGACCGGCGA GGAGTACGGC GGCGAGTACG TGACCATCAT GGCCGACTTC
ACGAGCTTCA GGTCCCACAG GGACTGCATC GTCTTCCGCT CCCGCGTGCT GCTGCAGAGC
GACCGCTACG CCGGGAACGA GCTCATACAG CGAGCTATCG CCGAGCACGA CTCGGACCTC
ATGGCCGAGG GCCTCAAGGA CGCCGGCTAC GCGACGAGCT CCGTCTACGT CGAGTCGCTG
AAATCCGTGA TGGACACGTA CGGCCTGAGG CGCTTCGACG GCATGAGCGT GGAGGACTGG
AAGAGCGGCA CAGCCTCCGG CAACGCCGTC GTCGCCGCCG CGACGAGCCA GCTCGGCGTT
CCCTACGTCT GGGGCGGCTC CACGCCGGGC GTGGGCCTGG ACTGCTCGGG ACTAACCCAG
TGGTGCTACG CGCAGGCCGG CATCGCGATC CCGCGCACGG CCGACGCCCA GGCTGCGGCG
GGCACGCACG TGCCGCTGTC CGAGGCGAGG CCCGGCGACA TCCTCTGGCG CCCGGGCCAC
GTCGCCATCT ACGCCGGAGG AGACGAGTAC ATACACGAGC CCCACTCGGG GGCCGTCTGC
GAGAGGTCGA GCGGCATCGC GTACTTCACC TGCGCGGTCC GGTTCCGATG A
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| Protein sequence | MPAKDVAYET HAPTLASDAA SAARDAGEAA RTGRTDAVSA GIVRASERRE FGAKTAGRPP
ATPSKQQVGA AKASKSKLDL TSEEQSRTAL HRATGAAYAG AASVARAADG TDDGDEDESV
AYPPSRRPAS ARAAEHAADA KEAAVADQQQ AARASAAKHA DKARSAGKAG KAAKADRERR
RASAAKARMQ SRRTWLKARA SQEAQAKAAG TVAKKGVRAR LAVAASSMAA PAAGALAGIL
FFVLAAILVS QLVSALFGFW DNEARAQAVE GLPPYITADM VEAALECQEQ YGHPAGCTLA
QIICESGQGD HLSGLATQDN NLFGIKWAAS FASCPEVSGK SSWSTGEEYG GEYVTIMADF
TSFRSHRDCI VFRSRVLLQS DRYAGNELIQ RAIAEHDSDL MAEGLKDAGY ATSSVYVESL
KSVMDTYGLR RFDGMSVEDW KSGTASGNAV VAAATSQLGV PYVWGGSTPG VGLDCSGLTQ
WCYAQAGIAI PRTADAQAAA GTHVPLSEAR PGDILWRPGH VAIYAGGDEY IHEPHSGAVC
ERSSGIAYFT CAVRFR
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