| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_18940 |
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| Symbol | |
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| ID | 8395783 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 2122545 |
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| End bp | 2125271 |
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| Gene Length | 2727 bp |
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| Protein Length | 908 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644986645 |
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| Product | hypothetical protein |
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| Protein accession | YP_003144259 |
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| Protein GI | 257064587 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3451] Type IV secretory pathway, VirB4 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0727779 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCTGAACC CTCTAGGCAA GAAGGCGAAG AATAAGGTCG ACAACGCTGA GGCGCCCGCG
AGGCGCAGGC CGCGGTCGGT GGAGAGGCGC ATCCGCGAGC AGGAGAAGCA GCTCACGGAC
CAGACGGCCG CGCAGAGGCG CAAGAGGCGC GCCGCGCGCG ACGTCTACTC GGCCGTCGGG
TTCGACCTCA TGTACAAGGA CGGCATCTGC CAGGTCGAGG AGGGCCTCTT CTCCCAGACC
ATCGCCTTCG ACGACATCAG CTACCAGTCC GCGCGCGAGG AGAGCCAGCA GGCCATCTTC
AGCGGGTGGT GCCAGCTGTT CGACTACTTC GGCGCGGAGA CCTGCGTGCA GCTCACCGTG
ACCAACACCC CCATACCGGC GTCCGAGATC GGGCGCATGA GGTTCTTCGA GGAGGGCGCC
CCGGAGACGG CGGAGTACGC CCGCGAGTAC AACCGGATCC TCAACGACAA AATGCGCGAG
GGCGTCTCCA ACCTCGTGCG CGAGCGCTAC CTGACCTTCA GCACGCTCGC GCCCGATGTC
GACGCCGCGG TGCCCAAGCT CGCCCGCATG CGCTCCGACG CCATGCAGAC GCTGAACAAG
ATCCGCAGCT CCGCGAGGCC GCTTAGCGGC GAGGAGAGGC TGCGCGCCAT CCACAGCCAG
CTCAGGCCCG GCAAGCCCTT CAGCTTCTCC TGGGACGCCG TGGGCGCGAC GCGCGGCCTG
ACCGCGAAGG ACCTCGTGTG CCCGATGTCG CTCGACTTCA AGCCGGAGGG CTCCGGCACC
TGCTACAGGA GCGAGGGCGT CTGGTGCCAG GTGCTCTCCC TGCACCGGTT CGGGAGCGAG
CTTTCCGACC GCTGCCTCGC CGAGATCATC GACCTGCCCA TACCGCTCAA CGTGACGCTG
CACGTGCAGG CCATGGACAA GGCCAAGGCC GTCGCCTACG TGAAGAAGCG CCTGGCGTGG
ATGGACAAGG AGATCATCGA CGAGCAGATG GGCGCCGTGA AGAAGGGCTA CGACTTCCAG
ATCCTGCCCA GCGAGCTCAA GTACTCCAAG GAGGAGGCCG AGGACCTGCT CGACCACCTG
CAGAACAAGA ACCAGCGCCT GTTCGTCTAC ACGGGGCTCG TGTTCACCTA CGCCCCGACG
CGCGAGGAGC TCGACGACCA GGTAATGCAG ATCGTCGCCA CCGCCAGGCG CAACTCCATC
GAGTGCGACA CGCTCGACTA CCGCCAGCGC GAGGGCATGA ACTCGATCCT ACCGCTCGGC
CACAACCACG TGCAGGTGTG CCGCATGATG ACGACCGCGC AGGTCGCCAT CCAGATGCCC
TTCGCGACCC AGGAGCTCGC CCAGGAGGGC GGCGGCTACT ACGGCCAGAA CAAGCAGAGC
TCCAACCTGG TGCTGTGCAA CCGCAAGCGC CTCGCGAGCC CCATGGGCTT CGTCGCGGGC
AAGCCGGGGT CGGGCAAGTC CTTCTCCGTG AAGCGCGAGA TCGAGAACAC GATCCTTGCG
TACCCCGACG ACGAGGTCAT CATCCTCGAC CCCGCCGGCG AGTACGCGCC AGTGGTGGAG
GGCAACGGCG GCGAGTGCAT CCGCTTCGCC CCCGACTCCG GCACGCACCT GAACCCCTTC
GACCTCTCCG ACGTGGCGCA CCAGTCGACG GCGGCGCAGA TGGCGTTCAA GATCGACGCG
TTCCTGGCGC TCTCGTCGGC CACCATGGCG GAGGGAAGCC AGGGGCTTCC CGAGGCGGAC
AAGTCCATCA TCAGCAGGTG CGTGGAGCTC GCGTACTCCG AGTGCGCCGA CGAGGGGCGC
CTGCCGCTTC TGGGCGACTT CCACCGCATC CTCTCGGAAC AGCCCGAGCG CGAGGCCCGC
GACATCGCGC TGCGCTACGA GCGCTACGTG AAGGGGGCGC TCTCGTTCTT CAACCACGAG
TCCAACGTCA CCTTCGAGAA GCGCATCACA AACATCGACT TCAAGGACCT CTCGGAGAAC
ATGCGGGCCT TCGGCATCGT CGCCGTCCTG GAGACGGTGC GCAACCGCAT GTACTACAAC
TTCGAGCGCG GCGTGACCAC CTGGCTCTAC ATCGACGAGG TGCAGAGCCT GTTCGGGCAC
CCGGCGGTGA TCACGTACTT CTCGAAGTTC TGGGCCGAGG GCCGCAAGTT CAACCTCGTC
TGCACCGGCA TCACGCAGAA CAGCGTCTAC ATGCTGGAGC ACGAGGAGGC CCGCAACATG
GTGCTCAACT CCGACTTCAT CCTGCTGCAC AAGCAGTCCC CGCTCGACCG CAAGGCATGG
GTCGACCTGC TGGACCTCTC CGCACAGGAG GCCGGGTACA TCGACGAGTC GATACGCGCC
GGCGAGGGCC TGCTCGTCGC CGGCGGCGCG CGCATCCCCA TAAAAGACGA CTTCCCCAAG
GGCGCGCTCT ACGACCTCTT CAACACCAAG CCTGAGGAGA TCGCCGCAAT GAAGAAGGCC
TCCGAGTTCG CCGCGAGGGC GCGCGAGCGC AAGGGGTCGG CGGCCCACGC AACGCTCGCG
GAGCGCTGCG CGCGGCTCGC GAGGGAGTCC GGAGGCGCCT GGCGGGGCAC GGCGACCGAG
CTCGCCGACG CCCTCGGCAT GGCGGGCGCC AACCCCTCGA AGCTCTCCAA GGACGTCGCT
GCATGCGGCC TGGAGTCCGC GGGTGCGTCC ATGAGGCGCG AGGCGCGCGG AAAGCGCACG
ACGATCGTCA TCTCCGCGAC GGCGTGA
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| Protein sequence | MLNPLGKKAK NKVDNAEAPA RRRPRSVERR IREQEKQLTD QTAAQRRKRR AARDVYSAVG
FDLMYKDGIC QVEEGLFSQT IAFDDISYQS AREESQQAIF SGWCQLFDYF GAETCVQLTV
TNTPIPASEI GRMRFFEEGA PETAEYAREY NRILNDKMRE GVSNLVRERY LTFSTLAPDV
DAAVPKLARM RSDAMQTLNK IRSSARPLSG EERLRAIHSQ LRPGKPFSFS WDAVGATRGL
TAKDLVCPMS LDFKPEGSGT CYRSEGVWCQ VLSLHRFGSE LSDRCLAEII DLPIPLNVTL
HVQAMDKAKA VAYVKKRLAW MDKEIIDEQM GAVKKGYDFQ ILPSELKYSK EEAEDLLDHL
QNKNQRLFVY TGLVFTYAPT REELDDQVMQ IVATARRNSI ECDTLDYRQR EGMNSILPLG
HNHVQVCRMM TTAQVAIQMP FATQELAQEG GGYYGQNKQS SNLVLCNRKR LASPMGFVAG
KPGSGKSFSV KREIENTILA YPDDEVIILD PAGEYAPVVE GNGGECIRFA PDSGTHLNPF
DLSDVAHQST AAQMAFKIDA FLALSSATMA EGSQGLPEAD KSIISRCVEL AYSECADEGR
LPLLGDFHRI LSEQPEREAR DIALRYERYV KGALSFFNHE SNVTFEKRIT NIDFKDLSEN
MRAFGIVAVL ETVRNRMYYN FERGVTTWLY IDEVQSLFGH PAVITYFSKF WAEGRKFNLV
CTGITQNSVY MLEHEEARNM VLNSDFILLH KQSPLDRKAW VDLLDLSAQE AGYIDESIRA
GEGLLVAGGA RIPIKDDFPK GALYDLFNTK PEEIAAMKKA SEFAARARER KGSAAHATLA
ERCARLARES GGAWRGTATE LADALGMAGA NPSKLSKDVA ACGLESAGAS MRREARGKRT
TIVISATA
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