Gene Shel_18720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_18720 
Symbol 
ID8395761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2100216 
End bp2100863 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content57% 
IMG OID644986623 
ProductRNA:NAD 2'-phosphotransferase 
Protein accessionYP_003144237 
Protein GI257064565 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1859] RNA:NAD 2'-phosphotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.635673 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.289098 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGGCGC GCCTTACTGC CGCGCCGATC CGTTCTCCCG CGCTTGCAGT CCCTGCCATT 
TGCGGCCTAT TCGGGACCGA CGACGACCAT AAGTTTTCCG TCTTCGTCGG TCCCGACGGA
AACGACGGGA CAGGGGAGGT AGGCCCTGCT TGGGACGCGC TCGTCGAGCA GGTACGTGCC
CACGAGCACG GATGGGCAAA CGTCGACGAG CTCGTCAAGG GCATCGCTTC CCTGCGTCCC
TTCACCCTTG AGATGCTGGA AGAAATCGTC GCCACAGACT CTAAGGGCAG GTACTCGTTC
AACGAAGACC ATTCTCTCGT CCGCGCCAAC CAGGGACACT CGGTCGATGT CGACGTCGAG
CTCGAGCCTA AAGATCCTCC CGAGGCGCTC TACCACGGTA CGGCGCAGAG GTTCCTGGGT
TCGATAATGA AACAGGGGCT TCTTCCCAAG GGTCGTCTTT ATGTCCATCT TTCTTCAGAC
GGAGAAACGG CGATCAAAGT TGGGAGTCGC CATGGAAGCC CCGTAATACT GAAGGTCGAT
ACGTGCGCTA TGCACGAAGA AGGTTTCGAG TTCTTCCTTT CGAAGAACGG AGTCTGGTTG
ACTAAGCACG TGCCGGCTAA GTACCTGACA ATAATTGAAA CGGATTAG
 
Protein sequence
MRARLTAAPI RSPALAVPAI CGLFGTDDDH KFSVFVGPDG NDGTGEVGPA WDALVEQVRA 
HEHGWANVDE LVKGIASLRP FTLEMLEEIV ATDSKGRYSF NEDHSLVRAN QGHSVDVDVE
LEPKDPPEAL YHGTAQRFLG SIMKQGLLPK GRLYVHLSSD GETAIKVGSR HGSPVILKVD
TCAMHEEGFE FFLSKNGVWL TKHVPAKYLT IIETD