Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_18720 |
Symbol | |
ID | 8395761 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 2100216 |
End bp | 2100863 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 644986623 |
Product | RNA:NAD 2'-phosphotransferase |
Protein accession | YP_003144237 |
Protein GI | 257064565 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1859] RNA:NAD 2'-phosphotransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.635673 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.289098 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGGGCGC GCCTTACTGC CGCGCCGATC CGTTCTCCCG CGCTTGCAGT CCCTGCCATT TGCGGCCTAT TCGGGACCGA CGACGACCAT AAGTTTTCCG TCTTCGTCGG TCCCGACGGA AACGACGGGA CAGGGGAGGT AGGCCCTGCT TGGGACGCGC TCGTCGAGCA GGTACGTGCC CACGAGCACG GATGGGCAAA CGTCGACGAG CTCGTCAAGG GCATCGCTTC CCTGCGTCCC TTCACCCTTG AGATGCTGGA AGAAATCGTC GCCACAGACT CTAAGGGCAG GTACTCGTTC AACGAAGACC ATTCTCTCGT CCGCGCCAAC CAGGGACACT CGGTCGATGT CGACGTCGAG CTCGAGCCTA AAGATCCTCC CGAGGCGCTC TACCACGGTA CGGCGCAGAG GTTCCTGGGT TCGATAATGA AACAGGGGCT TCTTCCCAAG GGTCGTCTTT ATGTCCATCT TTCTTCAGAC GGAGAAACGG CGATCAAAGT TGGGAGTCGC CATGGAAGCC CCGTAATACT GAAGGTCGAT ACGTGCGCTA TGCACGAAGA AGGTTTCGAG TTCTTCCTTT CGAAGAACGG AGTCTGGTTG ACTAAGCACG TGCCGGCTAA GTACCTGACA ATAATTGAAA CGGATTAG
|
Protein sequence | MRARLTAAPI RSPALAVPAI CGLFGTDDDH KFSVFVGPDG NDGTGEVGPA WDALVEQVRA HEHGWANVDE LVKGIASLRP FTLEMLEEIV ATDSKGRYSF NEDHSLVRAN QGHSVDVDVE LEPKDPPEAL YHGTAQRFLG SIMKQGLLPK GRLYVHLSSD GETAIKVGSR HGSPVILKVD TCAMHEEGFE FFLSKNGVWL TKHVPAKYLT IIETD
|
| |