Gene Shel_18710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_18710 
Symbol 
ID8395760 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2098437 
End bp2099738 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content63% 
IMG OID644986622 
Productpredicted ATPase (AAA+ superfamily) 
Protein accessionYP_003144236 
Protein GI257064564 
COG category[R] General function prediction only 
COG ID[COG1373] Predicted ATPase (AAA+ superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.188824 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.307627 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAGAG CCCTCATGGA GAAGCTGGTC GCCTGGAAGG ACAGCTCGCG CCGCAAGCCA 
CTCATTCTCA ACGGCGCCAG GCAGGTTGGC AAGACGTGGC TGCTCAAGGA GTTCGGGAGA
CTCCACTTCG AAAACGTCGC CTACGTCAGC CTCGATAACG ATTCGCTCGC GCGCGGCTAC
TTCGAGTCCG GCTTCGACAT CGCAAGGATC ATCGCCTCGC TCGCGCTCGA GCTCGACATG
GAGATACGGC CGGGGGAAAC GCTCATCGTC CTCGACGAGG TCCAGGCCTG CCCCAAGGCC
ATCACGTCCC TCAAGTACTT CTGCGAGAAC GCCCCCGAGT ACGCCGTTGC CGCAGCCGGA
TCGCTTCTGG GGATATCGGC AACCGAAGGA ACCGGCTATC CCGTCGGCAA GGTCAACACG
CTCGACCTCT ACCCGCTGAG CTTCACCGAG TTCCTCGACG CGACGGGAAA CGAAAGGTTC
GGAAAGCTCA TAGGATCGGG CGACGCGGAG ATGATGAACG CCTTCTCGGG CAAGCTCTCC
GAGCTCCTCA AGCAATACTA CGTTGTGGGA GGCATGCCCG AGGCGGTGAA TGCTTATGTT
GCCGAGCAGG ACGTGCGCGC CGCACGGGCA GTCCAACAAG AGATCCTGAA CGGATACGTG
AGCGATTTCG CGAAGCACAT ACCGCCCCGC CTGCTCGCGC GCACCATGCT CGCCTGGCAG
TCGATCCCGG GACACCTGTC GCAGGAGAAC AAGAAGTTCA TCTTCGGGCA GGTGCGCAAG
GGCGCCCGCG CGGCCGACTT CGAGGAGAGC CTCGCGTGGC TCCAGCAGGC AGGCCTGATT
TGCAAGGTGC GCCGCGTGAG CAAGCCGCAC GTGCCGCTGC CGAGCTATTG CAGCATGAGC
GCGTTCAAGG TCTTCATGGT GGACGTGGGG CTCCTCGGCG CCATGAGCGG CCTGGAGCCG
CGGGACGTCG TCGACGGCAA CAAGGTCTTC ACGGAGTTCA AAGGCGCGCT CACCGAGCAG
TACGTCTGCC AGCAGCTCAT ATCCGAGTGC GGCCTTTCGC CCTACTACTG GTCGGCGGAG
AACTCCTCCG GCGAGATCGA CTTCCTCGTC CAGGACGGCG GCAGCGTTTT CGCCATGGAG
GTGAAGGCCG AGGAGAACCT GCGCGCCAAG AGCCTGAGGG CGTTCAAAGA CGCGCATCCC
GAGGTCCGGG CGGTCCGCTT CAGCCTCTCG GGCTACCGCG AGCAGGACTG GATGCGCAAC
GTGCCCCTGT ACGCCATCTC CTGCAGGGAG CTTTGGGGAT AG
 
Protein sequence
MERALMEKLV AWKDSSRRKP LILNGARQVG KTWLLKEFGR LHFENVAYVS LDNDSLARGY 
FESGFDIARI IASLALELDM EIRPGETLIV LDEVQACPKA ITSLKYFCEN APEYAVAAAG
SLLGISATEG TGYPVGKVNT LDLYPLSFTE FLDATGNERF GKLIGSGDAE MMNAFSGKLS
ELLKQYYVVG GMPEAVNAYV AEQDVRAARA VQQEILNGYV SDFAKHIPPR LLARTMLAWQ
SIPGHLSQEN KKFIFGQVRK GARAADFEES LAWLQQAGLI CKVRRVSKPH VPLPSYCSMS
AFKVFMVDVG LLGAMSGLEP RDVVDGNKVF TEFKGALTEQ YVCQQLISEC GLSPYYWSAE
NSSGEIDFLV QDGGSVFAME VKAEENLRAK SLRAFKDAHP EVRAVRFSLS GYREQDWMRN
VPLYAISCRE LWG