Gene Shel_18590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_18590 
Symbol 
ID8395748 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2084339 
End bp2085187 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content61% 
IMG OID644986610 
Productmetallo-beta-lactamase superfamily enzyme 
Protein accessionYP_003144224 
Protein GI257064552 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.344551 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGATA TCAAAATCCA TGTGTTCCAT ACCGGCGAAG TGTGCGTGGC ACCCGACCTG 
CCCTTCGGCG GCGACAACTG CACCGCCGTG AAGGCGTCCG GCATCTTCGG CAAGAAGGAG
GACCGTCTGT GGCTGCCCGT GTCCGCTTAC CTTATCGAGC ACCCAAAAGG CCTCTTCCTC
GTGGATACCG GCTGGGCGCG CGCCATGAGC CCAGAGGGGG TATTCGATAA GAAGGCGCAG
ATCAAGTCGC TCGGCTCATG GGTCCTTTAC AAGGTGAACC AGGGGCGCAT CGGCATGGGG
GAATGCATCG ACGAACAGCT GGCGGCCATG GGTGTCGCGA CGAGCGACAT CGATGCGGTG
CTGCTCACCC ATCTGGACTG CGACCATGCG AACGGAATCG CACAGGTGGC CGACGCCAAG
CGCTTCGTGG TGGCGGCCGA CGAGGTCCGA TTCGCCAGCA AGGCGAGCAG CCGCGTGCGG
TACAACAAGG ATTGGTGGGG GATGGTCGAG CTTGACGCGG TCGAATGGAA CGGCGCTTTG
GGTCCCTTCG GCAAGTCCTT CGACCTTCTG GGCGACGGCT CCATCCAGCT TATCAACATC
CCGGGGCACG CTGACGGCTT GTTCGCCGTG AAGGTTACCA ATGGCGAAGG TAAGTTCGTG
CTGCTTTTCA GCGACGGAGG CTATGCCCGC AAAAGCTGGG AGGAGCAGAT CACGAGCGGC
ATCGCTGCCG ACAAGGCCAA GCAGAAAAGG TCGCTCGCGT GGATCCGCGA ACAGAGCCTC
GACCCGTTGT GCGTGGAGTC GCTGGCAAAC CACGATCCCG ATATCGAACC GCACGTCATC
GAGCTGTAA
 
Protein sequence
MSDIKIHVFH TGEVCVAPDL PFGGDNCTAV KASGIFGKKE DRLWLPVSAY LIEHPKGLFL 
VDTGWARAMS PEGVFDKKAQ IKSLGSWVLY KVNQGRIGMG ECIDEQLAAM GVATSDIDAV
LLTHLDCDHA NGIAQVADAK RFVVAADEVR FASKASSRVR YNKDWWGMVE LDAVEWNGAL
GPFGKSFDLL GDGSIQLINI PGHADGLFAV KVTNGEGKFV LLFSDGGYAR KSWEEQITSG
IAADKAKQKR SLAWIREQSL DPLCVESLAN HDPDIEPHVI EL