Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_18550 |
Symbol | |
ID | 8395744 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 2080719 |
End bp | 2081453 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644986607 |
Product | predicted transcriptional regulator |
Protein accession | YP_003144221 |
Protein GI | 257064549 |
COG category | [K] Transcription |
COG ID | [COG0789] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAACGG TACACGAGGT TAGCGACCTG TCAGGCATCA GCATCCGCAC GCTGCAGTAC TACGACAGAA TAGGGCTTCT GCACCCCACC GAACGCACAC AGGCAGGTTA CCGCCTGTAC AGCGACGACG ACCTGGCGCG GCTTCAGCAG ATACTGCTGT TCCGCGAGCT GGAGTTTCCG CTCAAAGACA TCAAAAGGAT AATCAACAGC CCGGATTTCG ACCGGTCGAA GGCCTTGGAG CAGCAGATCG AGCTTTTGGA GCTGCAACGC AGCCGCATCG CCCGCCTGAT CGCACTGGCC CGGGAATTGA AAGAGAAAGG AACCGGCATG CCGACATTCG AACCGTTCGA CACGAAGAAA ATCGACGAAT ACGCCGCACA GGCGAAGGCT TCGTGGGGCT CCACCCCCGA GTGGAAGGAA TACGAAAGCA AATCGGCCGG ACGCACGGAC GAGGAGGAGC GATCGATGGG CGAAGAGCTG CTGTCCCTGT TCAAGCCCTT CGGGCAAATG GCGGCCGAAG GTGCGGACCC TGCAAGCGAG AAGGCCCGCG AACAGGCGAA ACGCATCCAG GATTACATCA CCGAACACTT CTATACCTGC ACGGACGAAG TGTTCCTGCA GCTGAGCCGG GCCTACGGCG CAGGCGGCGA GTTCACGCGC AACATCGATG CCCACGCAGG CTCCGGAGCT GGTGCGTTCG CCATGCATGC GATCGAGGCG TATATCGAAG GCTAG
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Protein sequence | MRTVHEVSDL SGISIRTLQY YDRIGLLHPT ERTQAGYRLY SDDDLARLQQ ILLFRELEFP LKDIKRIINS PDFDRSKALE QQIELLELQR SRIARLIALA RELKEKGTGM PTFEPFDTKK IDEYAAQAKA SWGSTPEWKE YESKSAGRTD EEERSMGEEL LSLFKPFGQM AAEGADPASE KAREQAKRIQ DYITEHFYTC TDEVFLQLSR AYGAGGEFTR NIDAHAGSGA GAFAMHAIEA YIEG
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