Gene Shel_18550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_18550 
Symbol 
ID8395744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2080719 
End bp2081453 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content60% 
IMG OID644986607 
Productpredicted transcriptional regulator 
Protein accessionYP_003144221 
Protein GI257064549 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAACGG TACACGAGGT TAGCGACCTG TCAGGCATCA GCATCCGCAC GCTGCAGTAC 
TACGACAGAA TAGGGCTTCT GCACCCCACC GAACGCACAC AGGCAGGTTA CCGCCTGTAC
AGCGACGACG ACCTGGCGCG GCTTCAGCAG ATACTGCTGT TCCGCGAGCT GGAGTTTCCG
CTCAAAGACA TCAAAAGGAT AATCAACAGC CCGGATTTCG ACCGGTCGAA GGCCTTGGAG
CAGCAGATCG AGCTTTTGGA GCTGCAACGC AGCCGCATCG CCCGCCTGAT CGCACTGGCC
CGGGAATTGA AAGAGAAAGG AACCGGCATG CCGACATTCG AACCGTTCGA CACGAAGAAA
ATCGACGAAT ACGCCGCACA GGCGAAGGCT TCGTGGGGCT CCACCCCCGA GTGGAAGGAA
TACGAAAGCA AATCGGCCGG ACGCACGGAC GAGGAGGAGC GATCGATGGG CGAAGAGCTG
CTGTCCCTGT TCAAGCCCTT CGGGCAAATG GCGGCCGAAG GTGCGGACCC TGCAAGCGAG
AAGGCCCGCG AACAGGCGAA ACGCATCCAG GATTACATCA CCGAACACTT CTATACCTGC
ACGGACGAAG TGTTCCTGCA GCTGAGCCGG GCCTACGGCG CAGGCGGCGA GTTCACGCGC
AACATCGATG CCCACGCAGG CTCCGGAGCT GGTGCGTTCG CCATGCATGC GATCGAGGCG
TATATCGAAG GCTAG
 
Protein sequence
MRTVHEVSDL SGISIRTLQY YDRIGLLHPT ERTQAGYRLY SDDDLARLQQ ILLFRELEFP 
LKDIKRIINS PDFDRSKALE QQIELLELQR SRIARLIALA RELKEKGTGM PTFEPFDTKK
IDEYAAQAKA SWGSTPEWKE YESKSAGRTD EEERSMGEEL LSLFKPFGQM AAEGADPASE
KAREQAKRIQ DYITEHFYTC TDEVFLQLSR AYGAGGEFTR NIDAHAGSGA GAFAMHAIEA
YIEG