| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_18540 |
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| Symbol | |
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| ID | 8395743 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 2079261 |
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| End bp | 2080568 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644986606 |
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| Product | putative efflux protein, MATE family |
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| Protein accession | YP_003144220 |
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| Protein GI | 257064548 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACCAAG GTTCGGCGGC AAAGGTGTTC GCACGATACG CTATTCCGCA GATGATCGGT
CTGCTCTTCA ATTCGGTGTA CATAATCGTC GACGGCGTGT TCATCGGCAA CCGGCTCGGC
AGCATGGCCT TAGCGGCAAC CGGCGTCGCC GTGCCCGTGG TCGAGCTGCT CATCGCGTTG
AGTATGGCCG TGACCGCCGG GGCGGGCGTG GTGGTTTCGA CGCGCATCGC AAAGCGCGAG
CACGAACAGG CGGTCAGAGC CTTCCATACC TGCCTGGTGC TCCAGGGAAT AATCGGGCTG
TCCGTCGTCA TCCTGGGCAA CCTGTTCATC CACCCCTTGG CGAAGCTTCT GGGCGCCACT
CCTGACATCC AGGCCATGAC GGTAACCTAC CTTCGCTACG TCCTGTCTTT CGCACCGTTT
TTGCTGTTCG GCTACCTGCT CGGCGGCCTT GCCAGAAACG ACGGCAAACC GAAGCTGGCC
ATGGTGGCGC TGTCGGCAGG CTCGCTTTCG AACATCCTTC TCGACTACGT GTTCATGTAC
CCTTTGAACA TGGGCATCGC AGGCGCGGCG CTGGCAACAG GCATCGGCCC CATCGTCAGC
ATGGCCATCC TGCTCCCCCA CTTCTTCGCG GGAAAGGGCG TGCTGCGCTT CCAAAAGACT
GCGCTTTCCG GCAACGACGC GCGAAGCTTC CTGCGGCTCG GCCTTCCGTC ATTCGTCATG
GAGTTCAGCA TCGGCATGGT CACGTTCCTC ATGAACTTCG GCATCGTCCG CTACGGCTTC
GGCGAAAACG GGCTGGCGGC ATACCTCATC ATAGGCTACC TGATGCTCAT CGTGTTCACG
CTGTTCCTGG GGATGGCAGA GGGACTCCAA CCTGCGTTCA GTTACCTGCA TGCGGCGGGC
GACCACACCA AGCTCAAGGC CCTGCTGCGC TTCGCCGCCT GCGTGTTCAC GGCCGTAGGC
GTAGTGTCGT ACGTCCTGGT GCTGTTCTTC TCCATCCGGT TCTATTCGAT TTTCACGCCC
GAGGCCCACG AAGTGGCCGT CATGGCCGCT CAGAAGAGTA CCTGGTATTT CTGCGGATTG
GCCTTCGCGG GCATCAACAT CCTGTCGATT TCCTATTACC AAGCCACCGC CCAAACAGGA
AACGCCCTGC TTATCTCGTC TCTCAGGGGC TTCGTGCTCC CGGCGCTGCT CATTCTTATC
TTGCCGGCGG CATGCGGCCC GGAGCTGCTC TGGATCTGCC ATTCGACCGC CGAAATTATG
ACCACGCTCG TCTGCCTCGC ATGCGCCACC CACCTTCTCC GCCGCTAG
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| Protein sequence | MYQGSAAKVF ARYAIPQMIG LLFNSVYIIV DGVFIGNRLG SMALAATGVA VPVVELLIAL
SMAVTAGAGV VVSTRIAKRE HEQAVRAFHT CLVLQGIIGL SVVILGNLFI HPLAKLLGAT
PDIQAMTVTY LRYVLSFAPF LLFGYLLGGL ARNDGKPKLA MVALSAGSLS NILLDYVFMY
PLNMGIAGAA LATGIGPIVS MAILLPHFFA GKGVLRFQKT ALSGNDARSF LRLGLPSFVM
EFSIGMVTFL MNFGIVRYGF GENGLAAYLI IGYLMLIVFT LFLGMAEGLQ PAFSYLHAAG
DHTKLKALLR FAACVFTAVG VVSYVLVLFF SIRFYSIFTP EAHEVAVMAA QKSTWYFCGL
AFAGINILSI SYYQATAQTG NALLISSLRG FVLPALLILI LPAACGPELL WICHSTAEIM
TTLVCLACAT HLLRR
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