Gene Shel_18500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_18500 
Symbol 
ID8395740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2077006 
End bp2077527 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content63% 
IMG OID644986603 
ProductFe-S-cluster-containing hydrogenase subunit 
Protein accessionYP_003144217 
Protein GI257064545 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID[TIGR02951] DMSO reductase, iron-sulfur subunit 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAGA TGGGATTCCT GCTCGATCAG AAATACTGCA TCGGCTGCCA GACCTGCCAG 
CATGCCTGCC GCGTGCGCCA CGGCTTGGAG CCGGGAACCT ACCCGCGCAA GGCCACCAGC
AGCCAGATTC AGGTCGTCGG CCCGTTTTTG AGCATGGCCT GCAACCACTG CACCGCCCCG
GCATGCGTGG CCGTCTGCCC CGTAGGCGCT CTCACCAAGC GCGAGGATGA CGGCATCGTC
GTCCACGACC CTGAGATCTG CATCGGATGC CTTTCCTGCC AGCAGGCCTG CCCCTACGAC
CACCCGCAGC TGAACACCAT CACCGGCAAG ATGGTCAAAT GCGACATGTG CGCCGCCCTG
CAGGACAAGG GCGAAACCCC TGCCTGCGTT GAGGCTTGCC CCGTCAAGGT GCTCACCGTG
GGCACCATCG AGGATTTGGA AGCCCAGGGC GGAGTAAAGG AAGGCGTCGA TTTCACCTAC
GCCGAAACCG AGCCCAACTT CCGCTTCATC CCCATCGATT AA
 
Protein sequence
MSQMGFLLDQ KYCIGCQTCQ HACRVRHGLE PGTYPRKATS SQIQVVGPFL SMACNHCTAP 
ACVAVCPVGA LTKREDDGIV VHDPEICIGC LSCQQACPYD HPQLNTITGK MVKCDMCAAL
QDKGETPACV EACPVKVLTV GTIEDLEAQG GVKEGVDFTY AETEPNFRFI PID