| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_18480 |
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| Symbol | |
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| ID | 8395738 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 2072964 |
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| End bp | 2074430 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644986601 |
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| Product | transcriptional regulator with HTH domain and aminotransferase domain |
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| Protein accession | YP_003144215 |
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| Protein GI | 257064543 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.423474 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACGTT CGAAACAGCG CGAAATCATG CTTTCGGTCG ACGAGGGGTC GTTGGAGCCT
CTGTACCGCC AGATTTACCG GCAGGTGAGC GGTGCCATCG TCGACGGGTC GTTGGCTGCG
GGCGATCGGC TGCCTTCGAT ACGCAAGCTC TGCGGGCATC TGGGGGTGTC GCACACCACG
GTGGAGCAGG CCTACCTCCA GCTCGCCGTC GAAGGGTACG TGCGCAACAT GGCGCGCAGC
GGGTATGTGG TCGAAAAGCT GGATACCGGG TTTCTGCAGA TGACGCGAGA TTCTACCATC
GAGAAGAACG TGCAGCGGTC GGTCGAATCG CGCAGCCAGG ATGCTTTTTT CGCCGAGAAC
CTCCAAGGCG GACAGGCTCT CTACGATTTC TCCTATGCGA ACCTTCCCGA TGATTCGTTC
CCTGTGAAAA CGTGGTACCG GCTGGTGGGG GAGATGCTCC ACTCGTCGGT CATACCCGAG
CTGGGACGTT ATGCCTACAC TTCCGAACCC AACGAGCTCA GCCGACAGAT ATGTGCGTAC
CTCAAGCGGG CAAGAGGCGT CGATTGCGTG CCTGAGCAGG TGATTCCTCA ATCGGGTACC
GACGGGTCGC TGGCCACGGT GTTCCAGCTG TTCTCGCGGG AGCACCACAC GGTAGGGTTG
GAGGAGCCTG GCTACGCCAC GGTTAGCGAA GTGGCCCAGC GCATGGGGTT CGGTCTGGTG
CCGCTGCCGT CCGATTGCGG CATGGACGCC TATTTCGAGG CGCTGGAGCG TTACCGCCCG
AAGATCGTGT TCTGCACGCC GTCGCACCAG TTCCCCACGG GGCGCATCAT GGCGATCGAC
GCCCGAACAC GCCTTCTGAA GTGGGCGCAG CAGAACAACG CGTACATCAT CGAGGACGAC
AGCTGCAACG AGTACCGCTA CGAGACCGCG CCCATACCCA GCCTGCAGTC CCTCGACGCC
TACAGCCGCG TCATATATAT GTGCAACGTT TCGAAGGTCC TGTCGCCCAG CATGCGCGTG
GCCTATCTGG TGCTGCCGCC CAAGCTTCTG GGGCGCTATT TCCGTCTGTT CAACTACGCC
CACCCCAGCA TTCCGTGGCT GGAGCAGGAG GTGCTGGCGC GGTTCATGGC CGAAGGATAC
TGGGACCAGC ACATTCGCCG CATGACGAAG CTCATGCGCA AGCGCCACGA CGCGCTTCTG
TCCGGGCTTA CGGACGCGTT CGGCGACAGC ATACGCATAT CCGGGCAGCA TTCTGGCATG
CATCTGTACG TGTCCGTTCC CAACGGCATG ACGCAGCAGG AGCTCATTTC GAGCGCCAGA
CGGGAAGGGG CGGCGGTCTA CGGGACGCAG CGTATGTGGT TTTCGCGCTC CGCACCTGAG
GAAAGCCTGA TGGTGGGGTT CTCGTCCATC AAACCCGAAG ACATTCCCGC CGGGGTGGAA
GCCCTCGCGC GCGCTTGGCG CCGGTAG
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| Protein sequence | MARSKQREIM LSVDEGSLEP LYRQIYRQVS GAIVDGSLAA GDRLPSIRKL CGHLGVSHTT
VEQAYLQLAV EGYVRNMARS GYVVEKLDTG FLQMTRDSTI EKNVQRSVES RSQDAFFAEN
LQGGQALYDF SYANLPDDSF PVKTWYRLVG EMLHSSVIPE LGRYAYTSEP NELSRQICAY
LKRARGVDCV PEQVIPQSGT DGSLATVFQL FSREHHTVGL EEPGYATVSE VAQRMGFGLV
PLPSDCGMDA YFEALERYRP KIVFCTPSHQ FPTGRIMAID ARTRLLKWAQ QNNAYIIEDD
SCNEYRYETA PIPSLQSLDA YSRVIYMCNV SKVLSPSMRV AYLVLPPKLL GRYFRLFNYA
HPSIPWLEQE VLARFMAEGY WDQHIRRMTK LMRKRHDALL SGLTDAFGDS IRISGQHSGM
HLYVSVPNGM TQQELISSAR REGAAVYGTQ RMWFSRSAPE ESLMVGFSSI KPEDIPAGVE
ALARAWRR
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