Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_18310 |
Symbol | |
ID | 8395721 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 2059296 |
End bp | 2060372 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644986584 |
Product | uroporphyrinogen-III decarboxylase |
Protein accession | YP_003144198 |
Protein GI | 257064526 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
TIGRFAM ID | [TIGR01463] methyltransferase, MtaA/CmuA family |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGTGA GAAAAGATGA GATGACCTCG AATGAGCGTA TGGCGGCGTA CTTCGATGGG GAAGAGGTGG ACCGCCTGCC CGCCATGCCG ATGGTCGATT CCTTCGGCCC CAGGCTTGCC GGATACGAGA TGCGTTACAA GCGTCTTTCG GCGGAGCACC AGGTGGAAGT GCAGAAGGCC TGCTACGACC TGCTGGGATT GGACGGTCTG TCTATCGAGT ACGGTCTGCA CGGCATCGGC CAGGCCTGCG GCACCGTCCT GAACGATCCG GCCGACAGGA CGCCATCCAT CGACAAGCAC GTGCTTGAAT CCATCGAGCA GGTCGACCGA CTCGATCTGG ACTGCGTGCT GCGCAAGAAC GACCCGTGGA TCGACATGTG CATGACGGCC TGCGAAATGC TGGTGGACCA GATGGGCGAT GTGGTGGGGA CGTCGGCTAG TCTGACCGGT CCTTTGACGG CCGCAGCGAG CCTTCTTCCC ATGCGCGACC TACTGGTGGC CACCCGCAAG AAACCCGAGC TTGCCCGCAA GCTCATCCGG TTCTCGACCG ACGCTCTCAA GCTGGTGAGC GACCAGTTCG CAAGCCTGGG CGTGGACATC TTCATCTGCG ACCCGGTGGC ATCGGGCGAC ATCATCAACG AGAAGACCTA TCGCGAATGG GTGCTGCCCT ACACCCAGGA GCTGGCGCCT GTCATCCATA AGCACAACGT GGCCATGGGT TACCACATCT GCGGCAACAC CAACAAGATC ACGGGAGCTA TGCTGGAATC GGGCTGCGAC ATGCTGAGTG TGGACGCGAA GGTGCCGCTG ACCTTCGCGA AAGAGATGGG CGGCGACAAG GTGCCGATCA TCGGCAACGT CGACCCCATG GACGTCATGA TGCTGGGCAC GCCCGACGAG GTGCGCGAAA ACGTGCTGCG AAATATCGAG GATTGCGTCG ATTCGCCCTG CGGATACATC GTCTCGACCG GGTGTGACCT TCCTGTCAAT ACACCTTTGG AGAACGTGGT GGCGTTCATG GATGCCGTGC GCGAGTACGG TTCGGTCCGT ATCGGCCAGA AGGGAAGCGC TGTCTAA
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Protein sequence | MQVRKDEMTS NERMAAYFDG EEVDRLPAMP MVDSFGPRLA GYEMRYKRLS AEHQVEVQKA CYDLLGLDGL SIEYGLHGIG QACGTVLNDP ADRTPSIDKH VLESIEQVDR LDLDCVLRKN DPWIDMCMTA CEMLVDQMGD VVGTSASLTG PLTAAASLLP MRDLLVATRK KPELARKLIR FSTDALKLVS DQFASLGVDI FICDPVASGD IINEKTYREW VLPYTQELAP VIHKHNVAMG YHICGNTNKI TGAMLESGCD MLSVDAKVPL TFAKEMGGDK VPIIGNVDPM DVMMLGTPDE VRENVLRNIE DCVDSPCGYI VSTGCDLPVN TPLENVVAFM DAVREYGSVR IGQKGSAV
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