Gene Shel_18230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_18230 
Symbol 
ID8395713 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2050311 
End bp2051408 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content62% 
IMG OID644986576 
ProductABC-type metal ion transport system, periplasmic component/surface adhesin 
Protein accessionYP_003144190 
Protein GI257064518 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTCCAG AACAATCGAA TGCGGCCGCC CAGGCCGTAA AGGAGTGCAT CATCATGAAA 
CACATCGTGA ACGCCGCCCT CGCGGCGGCA ATGCTTTGCA TCGGGCTGCT CGTCGGATGC
ACCGGCACTG ACAGCCAAAA CGCAGACAAG AACCAAGGCG ACACCATCCG AATCGTGTGC
GCCACCTTCC CAGCCTACGA CTGGGTCAAC CAGGTGATAG GCGAAAACGC CGAGAACTAC
GAGGTCACCT ATCTCATGGG CAGCGGCGTG GACCTGCACA GCTACCAGCC CACGGTCGAA
GACATCGCCA AAATCGCCGA CGCGGACCTG TTCGTCTACG TGGGCGGCGA GTCCGACGAA
TGGGCCGCCG ACGCCGTCGA AGCCGCGAAC AACCCGGATT TGCACACCGT GAACATGCTC
GAAGCGATAG GCGACGCCGC GGTTGAAGAG GAAATCGTCG AAGGCATGGA GGCCGAAGAG
CACGACCATG GCCATGAGCA CGGCGAAGCC GACCATGAGG AAGGCGCCGA GCATGACCAC
GAGCACGAGC ATGGCGAAGC AGAGCTTGAC GAGCACGTGT GGCTGTCCCT CAAGAACGCC
CAGGTGCTGG TGGGCGCCAT CGCCGACGAG CTTGCCGAGA TCGACCCCGC AAACGCCGAC
GCCTACGCCG CCAACGCCGA AGCCTACAAC GCCCAGCTTT CCGATCTGGA CAGCCGTTAT
GCCGAAACCG TAAACGCCGC CGCCAAGGAC ACCGTGGTGT TCGCGGACCG CTTCCCCTTC
CGCTACCTTG TGGATGACTA CGGCCTGAAC TACTACGCCG CCTTCGTCGG CTGCTCCGCC
GAAACCGAAG CCAGTTTCGA CACCATCGCG TTTCTGGCCC AGAAGGTAGA CGAGCTGGGC
CTTGAAACCG TACTCGTCAT CGAGAACTCG GAAGAGACCA TCGCCCAGAC GGTCGTCCAG
AACACGGGCG GCAAGGACCA GCAGATACTG GTGATGGATT CGCTGCAGTC CACCACCGAC
GCAGACGTCG CCGCCGGCAA AACCTACCTG TCCGCCATGG AAGCCAATCT GGACGTCCTG
ACCCAAGCCC TGGCTTAA
 
Protein sequence
MFPEQSNAAA QAVKECIIMK HIVNAALAAA MLCIGLLVGC TGTDSQNADK NQGDTIRIVC 
ATFPAYDWVN QVIGENAENY EVTYLMGSGV DLHSYQPTVE DIAKIADADL FVYVGGESDE
WAADAVEAAN NPDLHTVNML EAIGDAAVEE EIVEGMEAEE HDHGHEHGEA DHEEGAEHDH
EHEHGEAELD EHVWLSLKNA QVLVGAIADE LAEIDPANAD AYAANAEAYN AQLSDLDSRY
AETVNAAAKD TVVFADRFPF RYLVDDYGLN YYAAFVGCSA ETEASFDTIA FLAQKVDELG
LETVLVIENS EETIAQTVVQ NTGGKDQQIL VMDSLQSTTD ADVAAGKTYL SAMEANLDVL
TQALA