Gene Shel_18180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_18180 
Symbol 
ID8395708 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2047146 
End bp2047604 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content59% 
IMG OID644986571 
Productpredicted transcriptional regulator 
Protein accessionYP_003144185 
Protein GI257064513 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.575083 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGAAGA TGTACACCAT CGGCGATGCG GCGGCTGAGC TGGGGATGCC GGCGTCGACC 
ATTCGCTTCT ACGAGAAGAA CGGGCTCATC CCCAACCAGC GCCGCTCAAG CGACGGCCGT
CGTCTGTTCG ACGAGGACGA CCTGGAATGG ATGCGCTTTG TGGAGCGTTT GAAGGTCTCG
GGCATGCCCA TCAAGGAGAT TCGCGAGTAC ATTCGGCTGT ACATCGAAGG CGATTCCACC
ATCGAGGAGC GCCGCCGCAT CGTCTACGAG CGTCAGGCCG CCATCGACGC GCAGATCGAG
GAGCTGAAGC TGGCGCGCGA TTTCATCCAC TACAAGTGCT GGTTCTACGA CGTGGCACGT
GAGTCGGGCA CCTGTGACAC GCCGCGCAAC ATGCCCTTCG ACGAGCTGCC CGACGATATC
AAACGCATCA AATCGAAGTG TCGGATCAAC AGGTACTAA
 
Protein sequence
MEKMYTIGDA AAELGMPAST IRFYEKNGLI PNQRRSSDGR RLFDEDDLEW MRFVERLKVS 
GMPIKEIREY IRLYIEGDST IEERRRIVYE RQAAIDAQIE ELKLARDFIH YKCWFYDVAR
ESGTCDTPRN MPFDELPDDI KRIKSKCRIN RY