Gene Shel_18100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_18100 
Symbol 
ID8395700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2042308 
End bp2043264 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content61% 
IMG OID644986563 
Productalpha/beta superfamily hydrolase 
Protein accessionYP_003144177 
Protein GI257064505 
COG category[R] General function prediction only 
COG ID[COG1073] Hydrolases of the alpha/beta superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.111266 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.7688 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATACG GATACATCGC AAACCTGCCC GAAGGCGTCG TACGTGAGCA CGTGCGCTTC 
AACAACCGTT ACGGCATCGC TATCGCCGGC GACCTGTACC GACCGGCCGA AATCGCCGAC
GGAGACAAAC TTCCCGCCAT AATCGTAGGC GCACCCTACG GCGGCGTGAA GGAGCAAGGC
CCTTGCGTCT ACGCCGGCGA ACTTGCCCGC CGCGGATTCG TGGCGCTCAC CTTCGACCAA
GTGTTCATGG GCGAATCCGG CGGCGAGCCC CGCAACGTGT CCAGTCCGGA GCTCTTCGCG
GAAAGCTTCA GCGCCTGCGT CGACTACCTG GGCGTGAAGG TTCCCTACGT GAACCGTGAG
AGGATCGGGG TCATCGGCAT CTGCGGATCC GGCGGCTTCG CATTGTCCGC AGCCCAGGTC
GACACCCGCA TCAAAGCCGT GGCAACCACA TCGATGTACG ACATTTCCGA CGTCCGCGGC
ATGTTCGGCG ACAACCTGGA GGCTCTGCAG GCCGAAAAGG ACCGGCTGGC CGCCCAACGC
TGGGTCGACT TCGAAGCCGG CCGTCCCGAA TACCTGCCCA GCTTCCCTGA GACGCCCTAC
AAAGACGTCG ATGCCCTTCC CGAAACAGAC CCGCTGACCA ACGAATGGAT GCGCTTCTAT
GCGGTGCCTC GCGGACACCA TCCCAACGCA CTTGGCGGGT TCACCACCAC ATCGAATGCA
GCCATGGCCA ACTTCCGCCT GCTCGACTTC ATCGACGAGA TATCCCCTCG CCCCATCCTG
TTCATCATGG GCGACCGAGC CCATTCGAAG TTCTTCAGCG AAAAGGCCTT CGCAGCCGCA
TCCGAACCGA AGGAGCTGTA CGTGGTCGAA GATGCCGAAC ACATCGATCT GTACGACCGC
ACGGACCGCA TCCCCTTCGA CAAGCTGGAA TCGTTTTTCG CCAACGCCTT GAGATAA
 
Protein sequence
MAYGYIANLP EGVVREHVRF NNRYGIAIAG DLYRPAEIAD GDKLPAIIVG APYGGVKEQG 
PCVYAGELAR RGFVALTFDQ VFMGESGGEP RNVSSPELFA ESFSACVDYL GVKVPYVNRE
RIGVIGICGS GGFALSAAQV DTRIKAVATT SMYDISDVRG MFGDNLEALQ AEKDRLAAQR
WVDFEAGRPE YLPSFPETPY KDVDALPETD PLTNEWMRFY AVPRGHHPNA LGGFTTTSNA
AMANFRLLDF IDEISPRPIL FIMGDRAHSK FFSEKAFAAA SEPKELYVVE DAEHIDLYDR
TDRIPFDKLE SFFANALR