Gene Shel_17950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_17950 
Symbol 
ID8395685 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2028776 
End bp2029558 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content61% 
IMG OID644986549 
Productpolyketide biosynthesis O-methyltransferase 
Protein accessionYP_003144163 
Protein GI257064491 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3315] O-Methyltransferase involved in polyketide biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACATCA CATTCGGCGA CATCCAAGAG ACAGCGCTGG TCACACTGGC CATACGCGCA 
AGCGAAACCG CGCGCCCCAA CCCGCGCATC CGAGACGAGA AGGCGGCCGA GATCATCCGC
ACCCTGGGCG TGGACGTGAG CAAATACGAC CCCTTCCTCT CCCATGAAGG CGTGGTGGCG
CGCACCATCA TGTTCGCAGA TGCGCTGCGC GCGCTTATCG AGAAGTTTCC CGACGCGGTC
TGCATAAACC TGGGGTGCGG CTTCGACGAC AAGTTCAGCC AGGTGGACAA CGGGCGCATC
GAGTGGTTCG ACGTGGACTT GCCCGACCAG ATCGCCGTGC GACGCAAGGT GTATGAAGAC
CGTCCGCGTT GCACCATGAT GGACGGCGAC GCGCTTGACG GCGGCTGGAC CGCACAGCTT
CCCAAGGGCC GGGACTACAT AATCGTGCTA GAAGGCGTTG TCGAATATTT CACGAAGGAG
CAGACGGCCA CATGCCTGCA CATGCTGTGC GACAGCTTCG AGCACGGCTG GCTTGTGTGC
GAGATGAATT CGCCGGTTAT GGCCAAGCAT TCCGACAAGC ACGACGCCAT CAAGAACACG
AACGCCACGT TCAAATGGGG CACGAAGTCT GGTGCGGAAT TCGTCGAGCT GGAGCCGAGG
ATGCAGCTTG TGTCCGAACG CAGCTACAAC GAGGAGATGC GCAAGCACAC GCTGCGCGGC
AAGCTGTTCG CCGCCACCGT CGGCAAGAAC CTGAACAACC GAATTGCCGT GTTCGCCTGG
TAG
 
Protein sequence
MDITFGDIQE TALVTLAIRA SETARPNPRI RDEKAAEIIR TLGVDVSKYD PFLSHEGVVA 
RTIMFADALR ALIEKFPDAV CINLGCGFDD KFSQVDNGRI EWFDVDLPDQ IAVRRKVYED
RPRCTMMDGD ALDGGWTAQL PKGRDYIIVL EGVVEYFTKE QTATCLHMLC DSFEHGWLVC
EMNSPVMAKH SDKHDAIKNT NATFKWGTKS GAEFVELEPR MQLVSERSYN EEMRKHTLRG
KLFAATVGKN LNNRIAVFAW