Gene Shel_17840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_17840 
Symbol 
ID8395674 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2015815 
End bp2016360 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content61% 
IMG OID644986538 
Productacetyltransferase, ribosomal protein N-acetylase 
Protein accessionYP_003144152 
Protein GI257064480 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAGG ACGTTTCTTT CCGCAAAGCC ACCATGGACG ATCTGGACCG CATCTCGGAG 
ATCTACGAGA TGATCCACGA TTTGGAAGAG CAGGGCAAGA TCACCGTCGG TTGGATCCGC
GGCGTGTATC CCACCCGCGA CACGGCCCAA GCCGCCATCC GCGCAGACGA GATGTTCGTC
GAGGAGTTCG ACGGGCGCAT CGTGGCCTCG GGGAAGATCA ACCAGAGCCA GGAGAACTCC
TATGCCGGCG GCGATTGGCG ATACGACGTG CCGAACGACC AAGTCATGGT GCTGCACACG
CTTACCGTGG CGCCTGACGA GGGCAAACAC GGGTTCGGCA CCAGGTTCGC AGCGTTCTAC
GAGCAATATG CGCTAGACCA TGGCTGCCCC TACCTGCGCA TCGACACCAA TGCCCGCAAC
GCCCGGGCGC GAGCCCTGTA TGCGAAGCTG GGCTATACGG AAGTCGGTAT CGTACCCACC
GTGTTCAACA ATATCCCCGA CGTGCAGCTG GTACTGTTGG AGAAGAAGGC GGTCGCCGAA
CGCTGA
 
Protein sequence
MSKDVSFRKA TMDDLDRISE IYEMIHDLEE QGKITVGWIR GVYPTRDTAQ AAIRADEMFV 
EEFDGRIVAS GKINQSQENS YAGGDWRYDV PNDQVMVLHT LTVAPDEGKH GFGTRFAAFY
EQYALDHGCP YLRIDTNARN ARARALYAKL GYTEVGIVPT VFNNIPDVQL VLLEKKAVAE
R