Gene Shel_17790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_17790 
Symbol 
ID8395669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2010610 
End bp2011464 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content61% 
IMG OID644986533 
Product4Fe-4S protein 
Protein accessionYP_003144147 
Protein GI257064475 
COG category[C] Energy production and conversion 
COG ID[COG4656] Predicted NADH:ubiquinone oxidoreductase, subunit RnfC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTATCC AGGACGACAT CCGAATCCGT GCGGCAGAGC TGCTTGCATC GGGCGACATC 
GCCGTGTTCG TGGGCTGGGA GGCCGGACGC CTGGAGAACC AGACCACGCC TTTCGTCATG
TCCGACCCCG CCCAGGCAGA TCGCCTGGTC TACAACGATT ATTGCGTGAA CACCCTGGCC
AAATACGCCC GTGACCTGGT AGGTCGTGGC AAGGTTGGCA TGGTGGTCCG CGGATGCGAC
AGCCGCGGCA TTGTGCGCCT GATCAACGAC ATGGTCATTT CACGCGATGA CGTCTACCTG
CTGGGCGTGG GATGCGCCGG CGTGCTGGAC CGCAAGACCG GTGAGATGCT CAAGAAATGC
ACCGAATGCC GCCACAACAA CCCGGTGCTC TGCGACGAGA TGATCGGCGA GCCCGTGGGG
AAACCCGTAC CTGAGAACCG TTTCTCCGAG GTCGCCTCGA TCGAAGCCAT GACGCAGCCC
GAGCGCTCGA ATTACTTCGA GAACATGTAC GCCAGCTGCA TCCGCTGCTA TGCCTGCCGC
GACGTGTGCC CCTGCTGCAC CTGCCGCGAG TGCTTCGTCG ACCAGCGCCG CGAAGGCTGG
GTGGGCAAGC AGAACAACGT AGCCGAGAAC CGCTTCTACA GTCTGACCCG CGTGATGCAC
ATCGGCGACC GTTGCATCGA ATGCGGCGAA TGCGAACGGG CCTGCCCCAT GGGGCTTCCC
CTCATGAAGC TCAACCGCAA GGTGATTCAG GACATGAACG CGCTGTTCGG CGAGTTCGAA
TCGTCCATGG GACTCAACGA TCCGCCCGAG GTGCTCACCA CCTATGACGT CAACGACCGA
GAAGAATTCA TGTAA
 
Protein sequence
MTIQDDIRIR AAELLASGDI AVFVGWEAGR LENQTTPFVM SDPAQADRLV YNDYCVNTLA 
KYARDLVGRG KVGMVVRGCD SRGIVRLIND MVISRDDVYL LGVGCAGVLD RKTGEMLKKC
TECRHNNPVL CDEMIGEPVG KPVPENRFSE VASIEAMTQP ERSNYFENMY ASCIRCYACR
DVCPCCTCRE CFVDQRREGW VGKQNNVAEN RFYSLTRVMH IGDRCIECGE CERACPMGLP
LMKLNRKVIQ DMNALFGEFE SSMGLNDPPE VLTTYDVNDR EEFM