Gene Shel_17610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_17610 
Symbol 
ID8395651 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1989677 
End bp1990210 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content63% 
IMG OID644986515 
Product2-oxoacid:ferredoxin oxidoreductase, gamma subunit 
Protein accessionYP_003144129 
Protein GI257064457 
COG category[C] Energy production and conversion 
COG ID[COG1014] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.32642 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGAGA TGCGCGTCGT TTTGGCCGGC TTCGGCGGCC AGGGCCTGCT GTTTGCAGGC 
AAGGTCATGG CCCATGCGGC CCTGATCGAC AACCACGAGG TCTCGTGGCT GCCATCCTAC
GGCCCCGAAA TGCGTGGCGG CACCGCCAAC TGCTCCGTCA TCATCTCCGA CGACCCCATC
GGGTCTCCCC TGGTGACCGA TCCCACCGTG CTGATCGCCA TGAACCAGCC CAGCGTGGAT
AAGTTCATCG ACGAGGTCGT CCCCGGCGGC ATCGTGCTTA TCGACGAGTC GCTGGTGAAC
CATGTTCCCG AGCGTGACGA CGTCAAGATC TTCACGCTGA ACGCCACCAA GATGGCCGAA
GAGGCGGGGC TGAAAGGCCT GGCCAACATC GTGCTGGTGG GCAAACTGTT CGCCGAAACC
AGCTTCTGCT CTGCGGAAAC CCTGGAGGAA GCCATCCGCC ACGTGGTTCC CGCCCGCAAA
GCGGCATACG TTCAGAAGAA CATCGACGCC GTCAAGCTGG GCGCCCAGGC GTAA
 
Protein sequence
MEEMRVVLAG FGGQGLLFAG KVMAHAALID NHEVSWLPSY GPEMRGGTAN CSVIISDDPI 
GSPLVTDPTV LIAMNQPSVD KFIDEVVPGG IVLIDESLVN HVPERDDVKI FTLNATKMAE
EAGLKGLANI VLVGKLFAET SFCSAETLEE AIRHVVPARK AAYVQKNIDA VKLGAQA